LOCUS BC001831 1927 bp mRNA linear HUM 04-JUN-2004
DEFINITION Homo sapiens protein phosphatase 5, catalytic subunit, mRNA (cDNA
clone IMAGE:2961155), partial cds.
ACCESSION BC001831
VERSION BC001831.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1927)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1927)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC001831.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: e Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923848.
FEATURES Location/Qualifiers
source 1..1927
/db_xref="H-InvDB:HIT000086094"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2961155"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1927
/gene="PPP5C"
/gene_synonym="PP5"
/gene_synonym="PPP5"
/db_xref="GeneID:5536"
/db_xref="MIM:600658"
CDS <1..1457
/gene="PPP5C"
/gene_synonym="PP5"
/gene_synonym="PPP5"
/codon_start=3
/product="PPP5C protein"
/protein_id="AAH01831.4"
/db_xref="GeneID:5536"
/db_xref="MIM:600658"
/translation="MAEGERTECAEPPRDEPPADGALKRAEELKTQANDYFKAKDYEN
AIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA
SNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVV
DSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVL
SKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSF
SVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFE
WLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNG
RSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYC
DQMGNKASYIHLQGSDLRPQFHQFTAVGRPSSGS"
BASE COUNT 502 a 524 c 506 g 395 t
ORIGIN
1 cgatggcgga gggcgagagg actgagtgtg ctgagccccc ccgggacgaa cccccggctg
61 atggagctct gaagcgggca gaggagctca agactcaggc caatgactac ttcaaagcca
121 aggactatga gaacgccatc aagttctaca gccaggccat cgagctgaac cccagcaatg
181 ccatctacta tggcaaccgc agcctggcct acctgcgcac tgagtgctat ggctacgcgc
241 tgggagacgc cacgcgggcc attgagctgg acaagaagta catcaagggt tattaccgcc
301 gggctgccag caacatggca ctgggcaagt tccgggccgc gctgcgagac tacgagacgg
361 tggtcaaggt gaagccccat gacaaggatg ccaaaatgaa ataccaggag tgcaacaaga
421 tcgtgaagca gaaggccttt gagcgggcca tcgcgggcga cgagcacaag cgctccgtgg
481 tggactcgct ggacatcgag agcatgacca ttgaggatga gtacagcgga cccaagcttg
541 aagacggcaa agtgacaatc agtttcatga aggagctcat gcagtggtac aaggaccaga
601 agaaactgca tcggaaatgt gcctaccaga ttctggtaca ggtcaaagag gtcctctcca
661 agctgagcac gctcgtggaa accacactca aagagacaga gaagattaca gtatgtgggg
721 acacccatgg ccagttctat gacctcctca acatattcga gctcaacggt ttaccctcgg
781 agaccaaccc ctatatattt aatggtgact ttgtggaccg aggctccttc tctgtagaag
841 tgatcctcac ccttttcggc ttcaagctcc tgtacccaga tcactttcac ctccttcgag
901 gcaaccacga gacagacaac atgaaccaga tctacggttt cgagggtgag gtgaaggcca
961 agtacacagc ccagatgtac gagctcttta gcgaggtgtt cgagtggctc ccgttggccc
1021 agtgcatcaa cggcaaagtg ctgatcatgc acggaggcct gttcagtgaa gacggtgtca
1081 ccctggatga catccggaaa attgagcgga atcgacaacc cccagattca gggcccatgt
1141 gtgacctgct ctggtcagat ccacagccac agaacgggcg ctcgatcagc aagcggggcg
1201 tgagctgtca gtttgggcct gacgtcacca aggccttctt ggaagagaac aacctggact
1261 atatcatccg cagccacgaa gtcaaggccg agggctacga ggtggctcac ggaggccgct
1321 gtgtcaccgt cttctctgcc cccaactact gcgaccagat ggggaacaaa gcctcctaca
1381 tccacctcca gggctctgac ctacggcctc agttccacca gttcacagca gtgggtaggc
1441 ccagcagtgg ttcttgacat cacacgatga ggcgcgcatc tcccgtcatc cagggagacc
1501 agaggaccct tgtctcactc ccagttggct cttagtcaca gccccgcttt gtctttgaca
1561 tggacgtttg tgatgatcac gttcctcccg ctccccgtgt ctgaagagtg ctccctgact
1621 ggctgccgtc tcctccctgt cgggtctggc tgggttctcc agagggagtg ctgcggaggg
1681 gacacagcag aggccccatg ctcgtgatgt atgttgcaga tcattttccc ccattctgtc
1741 cttttttgtt aaattgtggt aaaaagcaca taacataaac tgtaccacct taaccatttg
1801 aaagtatata tcccagactg tcttttatct ttagacttca cttgtggttt gttgccacag
1861 tacaagttta tttttatgaa gccaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaa
//