LOCUS       BC001817                1485 bp    mRNA    linear   HUM 04-NOV-2003
DEFINITION  Homo sapiens acyl-Coenzyme A dehydrogenase family, member 9, mRNA
            (cDNA clone IMAGE:3530094), partial cds.
ACCESSION   BC001817
VERSION     BC001817.2
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1485)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1485)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JAN-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Oct 28, 2003 this sequence version replaced BC001817.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 11 Row: k Column: 19
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 21361496.
FEATURES             Location/Qualifiers
     source          1..1485
                     /db_xref="H-InvDB:HIT000030669"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3530094"
                     /tissue_type="Muscle, rhabdomyosarcoma"
                     /clone_lib="NIH_MGC_17"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            <1..1485
                     /gene="ACAD9"
                     /gene_synonym="ACAD-9"
                     /gene_synonym="MGC14452"
                     /gene_synonym="NPD002"
                     /db_xref="GeneID:28976"
     CDS             <1..1032
                     /gene="ACAD9"
                     /gene_synonym="ACAD-9"
                     /gene_synonym="MGC14452"
                     /gene_synonym="NPD002"
                     /codon_start=1
                     /product="ACAD9 protein"
                     /protein_id="AAH01817.2"
                     /db_xref="GeneID:28976"
                     /translation="KIPVENILGEVGDGFKVAMNILNSGRFSMGSVVAGLLKRLIEMT
                     AEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAGMLDQPGFPDCSIEAA
                     MVKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRDTRILLIFEGTNEILRMYIAL
                     TGLQHAGRILTTRIHELKQAKVSTVMDTVGRRLRDSLGRTVDLGLTGNHGVVHPSLAD
                     SANKFEENTYCFGRTVETLLLRFGKTIMEEQLVLKRVANILINLYGMTAVLSRASRSI
                     RIGLRNHDHEVLLANTFCVEAYLQNLFSLSQLDKYAPENLDEQIKKVSQQILEKRAYI
                     CAHPLDRTC"
     misc_feature    34..477
                     /gene="ACAD9"
                     /gene_synonym="ACAD-9"
                     /gene_synonym="MGC14452"
                     /gene_synonym="NPD002"
                     /note="Acyl-CoA_dh; Region: Acyl-CoA dehydrogenase,
                     C-terminal domain. C-terminal domain of Acyl-CoA
                     dehydrogenase is an all-alpha, four helical up-and-down
                     bundle"
                     /db_xref="CDD:pfam00441"
BASE COUNT          368 a          384 c          417 g          316 t
ORIGIN      
        1 aagatacctg tggaaaacat ccttggagag gtcggagatg ggtttaaggt ggccatgaac
       61 atcctcaaca gcggccggtt cagcatgggc agcgtcgtgg ctgggctgct caagagattg
      121 attgaaatga ctgctgagta cgcctgcaca aggaaacagt ttaacaagag gctcagtgaa
      181 tttggattga ttcaggagaa atttgcactg atggctcaga aggcttacgt catggagagt
      241 atgacctacc tcacagcagg gatgctggac caacctggct ttcccgactg ctccatcgag
      301 gcagccatgg tgaaggtgtt cagctccgag gccgcctggc agtgtgtgag tgaggcgctg
      361 cagatcctcg ggggcttggg ctacacaagg gactatccgt acgagcgcat actgcgtgac
      421 acccgcatcc tcctcatctt cgagggaacc aatgagattc tccggatgta catcgccctg
      481 acgggtctgc agcatgccgg ccgcatcctg actaccagga tccatgagct taaacaggcc
      541 aaagtgagca cagtcatgga taccgttggc cggaggcttc gggactccct gggccgaact
      601 gtggacctgg ggctgacagg caaccatgga gttgtgcacc ccagtcttgc ggacagtgcc
      661 aacaagtttg aggagaacac ctactgcttc ggccggaccg tggagacact gctgctccgc
      721 tttggcaaga ccatcatgga ggagcagctg gtactgaagc gggtggccaa catcctcatc
      781 aacctgtatg gcatgacggc cgtgctgtcg cgggccagcc gctccatccg cattgggctc
      841 cgcaaccacg accacgaggt tctcttggcc aacaccttct gcgtggaagc ttacttgcag
      901 aatctcttca gcctctctca gctggacaag tatgctccag aaaacctaga tgagcagatt
      961 aagaaagtgt cccagcagat ccttgagaag cgagcctata tctgtgccca ccctctggac
     1021 aggacatgct gaggcagggg acagtgtccc ctgctaccgc ccgcccctac ccatggcccg
     1081 ttgctggatg actgttactc ttttttcaga aggtgttggg attatcacag gttaagcctt
     1141 ttgttccccg tctgcacctg aagggttgtc gcctggcctg ggagagcctc ttccaggttt
     1201 tgacctgcag gcagtgctct ctaacaggac catcacagct tctgaactga gccggagaga
     1261 gagaatggaa ttgctgaccc ctggaactgg cgggtattct ggtcattgag gagacaccat
     1321 agtggaaact ggggcttatg ctgctgcctc cagggtgtga ggtgggtggg gacctgtgtc
     1381 aggtgtggat agccatttct gctcaaccac acattctcta agaaacagct tgaaagctca
     1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//