LOCUS BC001669 1473 bp mRNA linear HUM 21-OCT-2003
DEFINITION Homo sapiens oxidase (cytochrome c) assembly 1-like, mRNA (cDNA
clone IMAGE:2823880), partial cds.
ACCESSION BC001669
VERSION BC001669.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1473)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1473)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC001669.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: n Column: 19.
FEATURES Location/Qualifiers
source 1..1473
/db_xref="H-InvDB:HIT000030563"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2823880"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1473
/gene="OXA1L"
/db_xref="GeneID:5018"
/db_xref="MIM:601066"
CDS <1..1314
/gene="OXA1L"
/codon_start=1
/product="OXA1L protein"
/protein_id="AAH01669.2"
/db_xref="GeneID:5018"
/db_xref="MIM:601066"
/translation="GKMAMGLMCGRRELLRLLQSGRRVHSVAGPSQWLGKPLTTRLLF
PVAPCCCRPHYLFLAASGPRSLSTSAISFAEVQVQAPPVVAATPSPTAVPEVASGETA
DVVQTAAEQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPL
IVTGQREAARIHNHLPEIQKFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKP
LILPVTQAPIFISFFIALREMANLPVPSLQTGGLWWFQDLTVSDPIYILPLAVTATMW
AVLELGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQVSC
LRIPAVRTVLKIPQRVVHDLDKLPPREGFLESFKKGWKNAEMTRQLREREQRMRNQLE
LAARGPLRQTFTHNPLLQPGKDNPPNIPSSSSKPKSKYPWHDTLG"
misc_feature 292..1047
/gene="OXA1L"
/note="YidC; Region: Preprotein translocase subunit YidC
[Intracellular trafficking and secretion]"
/db_xref="CDD:COG0706"
BASE COUNT 358 a 414 c 345 g 356 t
ORIGIN
1 ggcaaaatgg cgatgggact aatgtgcgga cgccgggagc ttctgcgctt gctacagtcc
61 gggcgtcggg tccacagcgt cgcagggccc tcgcaatggc ttgggaaacc gctgaccaca
121 cggctcctat tcccagtagc cccgtgctgc tgtcgcccac actacctctt ccttgcggct
181 tccggccccc gcagcctcag tacctctgct atctcttttg cagaagtcca ggttcaggcc
241 cctcctgttg ttgctgcaac tccctcaccc acagcagtac ctgaggtggc ttctggagag
301 actgcagatg tagtccaaac tgctgcagag cagagcttcg ctgaactggg gctggggtca
361 tacaccccag tgggactgat ccagaattta ctggaattta tgcatgttga tctgggccta
421 ccttggtggg gggccattgc tgcatgtaca gtctttgccc gctgcctgat ttttcctctc
481 atcgtgacgg gccagcgaga ggcagccagg atccacaatc acttgccaga gatccagaag
541 ttttccagtc gaatcagaga ggccaagtta gcaggagacc atattgagta ttacaaggct
601 tcctcggaga tggcacttta ccagaaaaaa catggtatta aactctataa acctctcatt
661 ctccctgtga ctcaggcccc aatcttcatc tccttcttca ttgctttgag agagatggcc
721 aaccttcctg tgcccagcct gcagacaggt ggcctctggt ggttccagga tctcacggta
781 tccgatccca tctacatatt accactggca gtcactgcta caatgtgggc tgttcttgag
841 ctaggtgctg agacaggtgt gcaaagttct gaccttcagt ggatgagaaa tgtcatcaga
901 atgatgcccc tgataacctt gcccataacc atgcatttcc ccacggcagt gtttatgtac
961 tggctctcct ccaatttgtt ttccctggtc caagtatcct gtctccggat tccagcagta
1021 cgcactgtac ttaaaatccc ccagcgtgtt gtacatgacc tggacaaatt acctccacgg
1081 gaaggcttcc tagagagctt caaaaaaggc tggaaaaatg ctgaaatgac gcgtcagctg
1141 cgagagcgtg aacaacgcat gcggaatcag ttggagctag cagccagggg tcctttacga
1201 cagaccttta cccacaaccc tctcctacaa cctggaaagg ataaccctcc caatatccct
1261 agcagcagca gcaaaccaaa gtcaaagtat ccctggcacg acacacttgg ctgacttatg
1321 ttctgtgcgc attctggcag gaattctgtc tcttcagaga ctcatcctca aaacaagact
1381 tgacactgtg tccttgcccc agtcctagga actgtggcac acagagatgt tcattttaaa
1441 aacggatttc atgaaaaaaa aaaaaaaaaa aaa
//