LOCUS BC001658 1623 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens ancient ubiquitous protein 1, mRNA (cDNA clone
MGC:1122 IMAGE:3050204), complete cds.
ACCESSION BC001658
VERSION BC001658.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1623)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1623)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: l Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32313574
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1623
/db_xref="H-InvDB:HIT000086066"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1122 IMAGE:3050204"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1623
/gene="AUP1"
/db_xref="GeneID:550"
/db_xref="HGNC:HGNC:891"
/db_xref="MIM:602434"
CDS 132..1253
/gene="AUP1"
/codon_start=1
/product="AUP1 protein"
/protein_id="AAH01658.1"
/db_xref="GeneID:550"
/db_xref="HGNC:HGNC:891"
/db_xref="MIM:602434"
/translation="MELPSGPGPERLFDSHRLPGDCFLLLVLLLYAPVGFCLLVLRLF
LGIHVFLVSCALPDSVLRRFVVRTMCAVLGLVARQEDSGLRDHSVRVLISNHVTPFDH
NIVNLLTTCSTPLLNSPPSFVCWSRGFMEMNGRGELVESLKRFCASTRLPPTPLLLFP
EEEATNGREGLLRFSSWPFSIQDVVQPLTLQVQRPLVSVTVSDASWVSELLWSLFVPF
TVYQVRWLRPVHRQLGEANEEFALRVQQLVAKELGQTGTRLTPADKAEHMKRQRHPRL
RPQSAQSSFPPSPGPSPDVQLATLAQRVKEVLPHVPLGVIQRDLAKTGCVDLTITNLL
EGAVAFMPEDITKGTQSLPTASASKAFDACLMMMTPQAL"
BASE COUNT 364 a 482 c 437 g 340 t
ORIGIN
1 ggcgcgcctc aggacttcgg gtcccctcac cccgggcgga tgcccaaaga ctccgccttc
61 ccaagagccc ctgcggccgg gcgcgaaaat ggcggcggcg gcgacggccg ggcgctcctg
121 aagcagcagt tatggagctt ccctcagggc cggggccgga gcggctcttt gactcgcacc
181 ggcttccggg tgactgcttc ctactgctcg tgctgctgct ctacgcgcca gtcgggttct
241 gcctcctcgt cctgcgcctc tttctcggga tccacgtctt cctggtcagc tgcgcgctgc
301 cagacagcgt ccttcgcaga ttcgtagtgc ggaccatgtg tgcggtgcta gggctcgtgg
361 cccggcagga ggactccgga ctccgggatc acagtgtcag ggtcctcatt tccaaccatg
421 tgacaccttt cgaccacaac atagtcaatt tgcttaccac ctgtagcacc cctctactca
481 atagtccccc cagctttgtg tgctggtctc ggggcttcat ggagatgaat gggcgggggg
541 agttggtgga gtcactcaag agattctgtg cttccacgag gcttcccccc actcctctgc
601 tgctattccc tgaggaagag gccaccaatg gccgggaggg gctcctgcgc ttcagttcct
661 ggccattttc tatccaagat gtggtacaac ctcttaccct gcaagttcag agacccctgg
721 tctctgtgac ggtgtcagat gcctcctggg tctcagaact gctgtggtca cttttcgtcc
781 ctttcacggt gtatcaagta aggtggcttc gtcctgttca tcgccaacta ggggaagcga
841 atgaggagtt tgcactccgt gtacaacagc tggtggccaa ggaattgggc cagacaggga
901 cacggctcac tccagctgac aaagcagagc acatgaagcg acaaagacac cccagattgc
961 gcccccagtc agcccagtct tctttccctc cctcccctgg tccttctcct gatgtgcaac
1021 tggcaactct ggctcagaga gtcaaggaag ttttgcccca tgtgccattg ggtgtcatcc
1081 agagagacct ggccaagact ggctgtgtag acttgactat cactaatctg cttgaggggg
1141 ccgtagcttt catgcctgaa gacatcacca agggaactca gtccctaccc acagcctctg
1201 cctccaaggc attcgatgcg tgtttaatga tgatgactcc gcaagccctc tgacattgtg
1261 atcacctcag tttcccagct ctggcccggt gacccctcag ccaacagccc taacatttgc
1321 caagtcttcc tgggcccggc aggagagcct gcaggagcgc aagcaagcac tatatgaata
1381 cgcaagaagg agattcacag agagacgagc ccaggaggct gactgagctc aaaggaacag
1441 gatggcaccc agagccgcag gacggagact gggggcagcc ctcacccaac tcacaacagg
1501 ctggatgggt gggtggtaaa aagggaagga tgaggctccc ccaatgtcac attaaattca
1561 tggttttcat tcaaggcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaa
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