LOCUS BC001217 2367 bp mRNA linear HUM 16-SEP-2005
DEFINITION Homo sapiens R3H domain containing 1, mRNA (cDNA clone
IMAGE:3356812), complete cds.
ACCESSION BC001217
VERSION BC001217.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2367)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2367)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: k Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543534
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2367
/db_xref="H-InvDB:HIT000030228"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3356812"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2367
/gene="R3HDM1"
/gene_synonym="KIAA0029"
/db_xref="GeneID:23518"
CDS 411..686
/gene="R3HDM1"
/gene_synonym="KIAA0029"
/codon_start=1
/product="R3HDM1 protein"
/protein_id="AAH01217.1"
/db_xref="GeneID:23518"
/translation="MRMSDTVTVKDETATMKDLEAEVKDTTRVENLIKSENYGKILVE
KNEHCIENNIDLQVNRNFSLATNTKYSVYIYVYFHTKLTSQNSKRVS"
BASE COUNT 683 a 519 c 525 g 640 t
ORIGIN
1 gaaggggcgg gattctgcca gccgcggctg ccgctggagc cggtgtccgg gctggtgatg
61 gggttaattc cctttcgtaa gactcttact tgcacccacc cagccccgcc gtcgccccgc
121 cgcgccgcgc tccaaccgcc tcctcctcct cagtaacgcg ggccacggaa aggtatgata
181 tatttgatcc aagacagtcc attccagtcc gggaatctac agtggtgaca aggacatggg
241 actcctcctg ccagattaca gatggttcac tacagttgac atcctggctg acaactgtga
301 aaaagaacct tggattattt tattttattt ttgtgggaca ccacaatccc aaatccaaag
361 gacgcatcag gcttcaagct ccctgtagaa ttcgaaaata accttttcta atgaggatgt
421 ctgatactgt tactgtaaaa gatgaaactg caacaatgaa ggatttggag gcagaagtga
481 aagatacaac cagagttgaa aatcttatca aatcagaaaa ctatgggaag attttggtag
541 agaagaatga acattgtatt gagaacaata tagatttgca ggtaaacagg aatttttctc
601 tggctacaaa tactaaatat tcagtatata tttatgttta ttttcataca aaactcactt
661 ctcaaaattc taaaagggta agttgaccct tcgtgacatg cttactagct ggttttggag
721 ccagttggat tagcttgctg tgagtcttaa cttggcttgt atcatgtaat atacttcttt
781 ttatttgtat gtggctagtg catttttatt ggctttctac tttctcattc cacccttttc
841 ctaattacca gtgctgtgag agttttgaac tctcacagtt aaattttgag tttaacctaa
901 gagctcttaa aggaaagaca aatagaatac aataaaactg cagacgaact attggcaaaa
961 acagccctca gggggttcct cagtcactca acctgactga caaaaaagat ttgtgggccc
1021 gggggaagtt aatgctttta atgctgtgca tatataatga cttagagcta gccactgaga
1081 aggcttctaa ttccaggcat aaatggaaat tgagttgatt aacaaattga agataggtaa
1141 aaatggtccc aagtaatagc atttctagta ctattcattt ctttggtaag gttttccagt
1201 tatctatttt ctcagaatga agggctaaca cttttaaaca atttatttta ttttatttta
1261 tttttttgag atggagtctc tctctgtcgc ccaggctgga gagcagtggt gtgatctcgg
1321 ctcactgcag cctccctctc ctgggttcga gcaattctcc tgcctcagcc tcccgagtag
1381 ctgggactac aggcatgcac ccccacaccc ggctaatttt tctattttag tagagatgga
1441 gtttcactgt gttgcctagg ctgttctaga actcctgagc tccggcgatc cgcccacctc
1501 ggcttcccat aatgctggga ttacaggcgc aagccatcgc acctggccca caattttttt
1561 tttaatatct catcatttat cagtcaggaa acgaagcaag gcttgggctg agtgaatttt
1621 ctattctaca gggtatccaa agaggtcctt tgttggcatt taacaggccg gtggacttgg
1681 tctggagcat cccggattgc ttctcgcacc tgtctggcac ctaggtaggc aaggctgcag
1741 tgctgggctc aggtagaact agaagcacct atttatggct cctccaacaa ggtgggtcca
1801 aagtagtcag acttcttatg tggcagctca ggggtcccag agagaatgtt ccaagaaagc
1861 caagcaaagc tgcaaggttt cttttgacat aggcccagaa gttccagaac gttacttcag
1921 ctatcttctt ttgatgacat aagtcaataa agccaggcca gaggatgggg aattagaccc
1981 tacctctcag taggaaagaa tttgtagcca cctttaagct accacaaaaa gttattcaaa
2041 aaaaaattgt ttaggccggg agcgatggct gtaatcccag cactttggga gaccgaggtg
2101 agtggatcac aaggtcagga gatcgagacc atcctgacca acatggtgaa accctgtctc
2161 tagtaaaaat acaaaaaatt ggccgggcat ggttgcgcgc acctatagtc ccagctatcc
2221 tgaggcaggg gaatcactcg aacccgggag gcagaggttg cagtgagcca agatcgcacc
2281 actgcactcc agcctggtga cagagcaaga ctccatctca aaaaaaaaaa aaaaaaaaaa
2341 aaaaaaaaaa aaaaaaaaaa aaaaaaa
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