LOCUS BC001023 1203 bp mRNA linear HUM 27-MAY-2005 DEFINITION Homo sapiens major histocompatibility complex, class II, DR beta 3, mRNA (cDNA clone MGC:2284 IMAGE:3345335), complete cds. ACCESSION BC001023 VERSION BC001023.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1203) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1203) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (17-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC001023.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 5 Row: n Column: 21. FEATURES Location/Qualifiers source 1..1203 /db_xref="H-InvDB:HIT000030076_03" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2284 IMAGE:3345335" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1203 /gene="HLA-DRB3" /db_xref="GeneID:3125" CDS 61..861 /gene="HLA-DRB3" /codon_start=1 /product="HLA-DRB3 protein" /protein_id="AAH01023.1" /db_xref="GeneID:3125" /translation="MVCLKLPGGSCMAALTVTLMVLSSPLALAGDTQPRFLWQGKYKC HFFNGTERVQFLERLFYNQEEFVRFDSDVGEYRAVTELGRPVAESWNSQKDILEDRRG QVDTVCRHNYGVGESFTVQRRVHPEVTVYPAKTQPLQHHNLLVCSVSGFYPGSIEVRW FRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVMSPLTVEWR ARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPTGFLS" BASE COUNT 270 a 327 c 331 g 275 t ORIGIN 1 gttctccctg agtgagactc acctgctcct ctggcccctg gtcctgtcct gttctccagc 61 atggtgtgtc tgaagctccc tggaggctcc tgcatggcag ctctgacagt gacactgatg 121 gtgctgagct ccccactggc tttggctggg gacacccaac cacgtttcct gtggcagggt 181 aagtataagt gtcatttctt caacgggacg gagcgggtgc agttcctgga aagactcttc 241 tataaccagg aggagttcgt gcgcttcgac agcgacgtgg gggagtaccg ggcggtgacg 301 gagctagggc ggcctgtcgc cgagtcctgg aacagccaga aggacatcct ggaggacagg 361 cggggccagg tggacaccgt gtgcagacac aactacgggg ttggtgagag cttcacagtg 421 cagcggcgag tccatcctga ggtgactgtg tatcctgcca agactcagcc cctgcagcac 481 cacaacctcc tggtctgctc tgtgagtggt ttctatccag gcagcattga agtcaggtgg 541 ttccggaacg gccaggaaga gaaggctggg gtggtgtcca caggcctgat ccagaatgga 601 gactggacct tccagaccct ggtgatgctg gaaacagttc ctcggagtgg agaagtttac 661 acctgccaag tggagcaccc aagtgtgatg agccctctca cagtggaatg gagagcacgg 721 tctgaatctg cacagagcaa gatgctgagt ggagtcgggg gctttgtgct gggcctgctc 781 ttccttgggg ccgggttgtt catctacttc aggaatcaga aaggacactc tggacttcag 841 ccaacaggat tcctgagctg aagtgaagat gaccacattc aaggaaaaac cttctgcccc 901 agctttgcag gatgaaacac ttccccgctt ggctctcatt cttccacaag agagaccttt 961 ctccggacct ggttgctact ggttcagcaa ctctgcagaa aatgtcctcc cctgtggctg 1021 cctcagctca tgcctttggc ctgaagtccc agcattgatg gcagcccctc atcttccaag 1081 ttttgtgctc ccctttacct aacgcttcct gcctcccatg catctgtact cctcctgtgc 1141 cacaaacaca ttacattatt aaatgtttct caaacatgga aaaaaaaaaa aaaaaaaaaa 1201 aaa //