LOCUS BC000724 2078 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal accessory protein 1, mRNA (cDNA clone MGC:1570 IMAGE:3506925), complete cds. ACCESSION BC000724 VERSION BC000724.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2078) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2078) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC000724.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: g Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37577154. FEATURES Location/Qualifiers source 1..2078 /db_xref="H-InvDB:HIT000029869" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1570 IMAGE:3506925" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2078 /gene="ATP6AP1" /gene_synonym="16A" /gene_synonym="Ac45" /gene_synonym="CF2" /gene_synonym="ORF" /gene_synonym="VATPS1" /gene_synonym="XAP-3" /gene_synonym="XAP3" /db_xref="GeneID:537" /db_xref="HGNC:HGNC:868" /db_xref="MIM:300197" CDS 19..1431 /gene="ATP6AP1" /gene_synonym="16A" /gene_synonym="Ac45" /gene_synonym="CF2" /gene_synonym="ORF" /gene_synonym="VATPS1" /gene_synonym="XAP-3" /gene_synonym="XAP3" /codon_start=1 /product="ATPase, H+ transporting, lysosomal accessory protein 1" /protein_id="AAH00724.1" /db_xref="GeneID:537" /db_xref="HGNC:HGNC:868" /db_xref="MIM:300197" /translation="MMAAMATARVRMGPRCAQALWRMPWLPVFLSLAAAAAAAAAEQQ VPLVLWSSDRDLWAPAADTHEGHITSDLQLSTYLDPALELGPRNVLLFLQDKLSIEDF TAYGGVFGNKQDSAFSNLENALDLAPSSLVLPAVDWYAVSTLTTYLQEKLGASPLHVD LATLRELKLNASLPALLLIRLPYTASSGLMAPREVLTGNDEVIGQVLSTLKSEDVPYT AALTAVRPSRVARDVAVVAGGLGRQLLQKQPVSPVIHPPVSYNDTAPRILFWAQNFSV AYKDQWEDLTPLTFGVQELNLTGSFWNDSFARLSLTYERLFGTTVTFKFILANRLYPV SARHWFTMERLEVHSNGSVAYFNASQVTGPSIYSFHCEYVSSLSKKGSLLVARTQPSP WQMMLQDFQIQAFNVMGEQFSYASDCASFFSPGIWMGLLTSLFMLFIFTYGLHMILSL KTMDRFDDHKGPTISLTQIV" BASE COUNT 395 a 618 c 573 g 492 t ORIGIN 1 gcagtggagg ctgaggctat gatggcggcc atggcgacgg ctcgagtgcg gatggggccg 61 cggtgcgccc aggcgctctg gcgcatgccg tggctgccgg tgtttttgtc gttggcggcg 121 gcggcggcgg cggcagcggc ggagcagcag gtcccgctgg tgctgtggtc gagtgaccgg 181 gacttgtggg ctcctgcggc cgacactcat gaaggccaca tcaccagcga cttgcagctc 241 tctacctact tagatcccgc cctggagctg ggtcccagga atgtgctgct gttcctgcag 301 gacaagctga gcattgagga tttcacagca tatggcggtg tgtttggaaa caagcaggac 361 agcgcctttt ctaacctaga gaatgccctg gacctggccc cctcctcact ggtgcttcct 421 gccgtcgact ggtatgcagt cagcactctg accacttacc tgcaggagaa gctcggggcc 481 agccccttgc atgtggacct ggccaccctg cgggagctga agctcaatgc cagcctccct 541 gctctgctgc tcattcgcct gccctacaca gccagctctg gtctgatggc acccagggaa 601 gtcctcacag gcaacgatga ggtcatcggg caggtcctga gcacactcaa gtccgaagat 661 gtcccataca cagcggccct cacagcggtc cgcccttcca gggtggcccg tgatgtagcc 721 gtggtggccg gagggctagg tcgccagctg ctacaaaaac agccagtatc acctgtgatc 781 catcctcctg tgagttacaa tgacaccgct ccccggatcc tgttctgggc ccaaaacttc 841 tctgtggcgt acaaggacca gtgggaggac ctgactcccc tcacctttgg ggtgcaggaa 901 ctcaacctga ctggctcctt ctggaatgac tcctttgcca ggctctcact gacctatgaa 961 cgactctttg gtaccacagt gacattcaag ttcattctgg ccaaccgcct ctacccagtg 1021 tctgcccggc actggtttac catggagcgc ctcgaagtcc acagcaatgg ctccgtcgcc 1081 tacttcaatg cttcccaggt cacagggccc agcatctact ccttccactg cgagtatgtc 1141 agcagcctga gcaagaaggg tagtctcctc gtggcccgca cgcagccctc tccctggcag 1201 atgatgcttc aggacttcca gatccaggct ttcaacgtaa tgggggagca gttctcctac 1261 gccagcgact gtgccagctt cttctccccc ggcatctgga tggggctgct cacctccctg 1321 ttcatgctct tcatcttcac ctatggcctg cacatgatcc tcagcctcaa gaccatggat 1381 cgctttgatg accacaaggg ccccactatt tctttgaccc agattgtgtg accctgtgcc 1441 agtggggggg ttgagggtgg gacggtgtcc gtgttgttgc tttcccaccc tgcagcgcac 1501 tggactgaag agcttccctc ttcctactgc agcatgaact gcaagctccc ctcagcccat 1561 cttgctccct cttcagcccg ctgaggagct ttcttgggct gcccccatct ctcccaacaa 1621 ggtgtacata ttctgcgtag atgctagacc aaccagcttc ccagggttcg tcgctgtgag 1681 gcgtaaggga catgaattct agggtctcct ttctccttat ttattcttgt ggctacatca 1741 tccctggctg tggatagtgc ttttgtgtag caaatgctcc ctccttaagg ttatagggct 1801 ccctgagttt gggagtgtgg aagtactact taactgtctg tcctgcttgg ctgtcgttat 1861 cgttttctgg tgatgttgtg ctaacaataa gaagtacacg ggtttatttc tgtggcctga 1921 gaaggaaggg acctccacga caggtgggct gggtgcgatc gccggctgtt tggcatgttc 1981 ccaccgggag tgccgggcag gagcatgggg tgcttggttg tttccttcct aataaaataa 2041 acgcgggtcg ccaaaaaaaa aaaaaaaaaa aaaaaaaa //