LOCUS BC000661 1518 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens peroxisomal membrane protein 3, 35kDa, mRNA (cDNA
clone MGC:1658 IMAGE:3347824), complete cds.
ACCESSION BC000661
VERSION BC000661.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1518)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1518)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000661.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: d Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506342.
FEATURES Location/Qualifiers
source 1..1518
/db_xref="H-InvDB:HIT000029815"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1658 IMAGE:3347824"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1518
/gene="PXMP3"
/gene_synonym="PAF-1"
/gene_synonym="PAF1"
/gene_synonym="PEX2"
/gene_synonym="PMP3"
/gene_synonym="PMP35"
/gene_synonym="RNF72"
/db_xref="GeneID:5828"
/db_xref="HGNC:HGNC:9717"
/db_xref="MIM:170993"
CDS 232..1149
/gene="PXMP3"
/gene_synonym="PAF-1"
/gene_synonym="PAF1"
/gene_synonym="PEX2"
/gene_synonym="PMP3"
/gene_synonym="PMP35"
/gene_synonym="RNF72"
/codon_start=1
/product="peroxisomal membrane protein 3, 35kDa"
/protein_id="AAH00661.1"
/db_xref="GeneID:5828"
/db_xref="HGNC:HGNC:9717"
/db_xref="MIM:170993"
/translation="MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGF
KPGLLARFEPEVKACLWVFLWRFTIYSKNATVGQSVLNIKYKNDFSPNLRYQPPSKNQ
KIWYAVCTIGGRWLEERCYDLFRNHHLASFGKVKQCVNFVIGLLKLGGLINFLIFLQR
GKFATLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKA
KLSSWCIPLTGAPNSDNTLATSGKECALCGERPTMPHTIGCEHIFCYFCAKSSFLFDV
YFTCPKCGTEVHSLQPLKSGIEMSEVNPL"
BASE COUNT 466 a 273 c 320 g 459 t
ORIGIN
1 gaaaagacaa gctttccaga gaatgtttca gagaaagtta cgtggagcgt gggcgtttcg
61 cagactccta agtggtctgg aacctaacct gcagtgtctc tgagcttctg gcaagtatga
121 ggcaaggatt tcacagaaga acttggagca aaaattccca ctgtcatagc tataggctgt
181 ccagtcttga gggagctgca ggaacaggaa aaagagacct tcagagaaga catggcttcc
241 agaaaagaga atgcgaagag tgcaaacaga gtgctaagaa taagccagtt ggatgcactt
301 gaactaaaca aggccctgga gcagctagtt tggtcccagt ttactcagtg ctttcatgga
361 tttaaacctg ggctgttagc tcgctttgag ccagaggtga aagcgtgctt atgggttttc
421 ttgtggagat tcaccatcta ctccaaaaat gccacagtgg gacagtcagt tttgaatatt
481 aagtacaaaa atgatttttc ccctaacctg agatatcagc cacccagtaa aaatcaaaaa
541 atctggtatg ctgtttgtac aattggtggc aggtggttag aagaacgatg ctatgatttg
601 tttcgaaacc atcatttagc atcatttggg aaagtcaagc agtgtgtgaa ttttgtgatt
661 ggacttttga aattaggtgg gctgattaat tttttgattt tccttcagag gggaaagttt
721 gcaactttga cagaacgtct cctaggtatt cattctgtat tttgcaagcc tcaaaacata
781 cgtgaagttg gctttgaata catgaatagg gaacttctct ggcatggttt tgctgaattt
841 ctgatttttc tcttaccact tatcaatgtc cagaagttga aagccaagct gtcttcatgg
901 tgtattcctc ttactggtgc acctaatagt gacaatacat tagccaccag tggcaaagaa
961 tgcgctctat gtggagagcg gcccaccatg cctcacacca taggatgtga gcatattttc
1021 tgttatttct gtgctaagag tagtttctta tttgacgtgt actttacttg tcctaagtgt
1081 ggcacagaag tacacagtct gcagccactg aaatcaggaa tcgagatgtc agaagtaaat
1141 cctctttaga aactaaaatt gcttcctttg aggaaaaaaa tgcaccgtgt ttaaattctt
1201 aatattagtc atcctaagta taccatttat gtatccttta taaggaatgt gctcctagcc
1261 actgtcttct cctttccagg catgactgaa atctaatcac tggaaaccat gtgattctaa
1321 atatattatg taaatgttaa tgtattatgt tttttaaatc attgcattca atttttaatg
1381 tcaagaataa tggacagctt ttgtcaggtg actactaaca atgctccttc attttactac
1441 ttcttaaaac aaggttggat tctaaagata aagattttgg agactctgaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaa
//