LOCUS BC000496 2013 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peroxisomal biogenesis factor 19, mRNA (cDNA clone
MGC:8403 IMAGE:2820701), complete cds.
ACCESSION BC000496
VERSION BC000496.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2013)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2013)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC000496.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: d Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46358408.
FEATURES Location/Qualifiers
source 1..2013
/db_xref="H-InvDB:HIT000029678"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8403 IMAGE:2820701"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2013
/gene="PEX19"
/gene_synonym="D1S2223E"
/gene_synonym="HK33"
/db_xref="GeneID:5824"
/db_xref="HGNC:HGNC:9713"
/db_xref="MIM:600279"
CDS 3..902
/gene="PEX19"
/gene_synonym="D1S2223E"
/gene_synonym="HK33"
/codon_start=1
/product="peroxisomal biogenesis factor 19"
/protein_id="AAH00496.1"
/db_xref="GeneID:5824"
/db_xref="HGNC:HGNC:9713"
/db_xref="MIM:600279"
/translation="MAAAEEGCSVGAEADRELEELLESALDDFDKAKPSPAPPSTTTA
PDASGPQKRSPGDTAKDALFASQEKFFQELFDSELASQATAEFEKAMKELAEEEPHLV
EQFQKLSEAAGRVGSDMTSQQEFTSCLKETLSGLAKNATDLQNSSMSEEELTKAMEGL
GMDEGDGEGNILPIMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQFEKY
QEQHSVMCKICEQFEAETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAGEMPPGL
NFDLDALNLSGPPGASGEQCLIM"
BASE COUNT 528 a 510 c 480 g 495 t
ORIGIN
1 agatggccgc cgctgaggaa ggctgtagtg tcggggccga agcggacagg gaattggagg
61 agcttctgga aagtgctctt gatgatttcg ataaagccaa accctcccca gcaccccctt
121 ctaccaccac ggcccctgat gcttcggggc cccagaagag atcgccagga gacactgcca
181 aagatgccct cttcgcttcc caagagaagt ttttccagga actattcgac agtgaactgg
241 cttcccaagc cactgcggag ttcgagaagg caatgaagga gttggctgag gaagaacccc
301 acctggtgga gcagttccaa aagctctcag aggctgcagg gagagtgggc agtgatatga
361 cctcccaaca agaattcact tcttgcctaa aggaaacact aagtggatta gccaaaaatg
421 ccactgacct tcagaactcc agcatgtcgg aagaagagct gaccaaggcc atggaggggc
481 taggcatgga cgaaggggat ggggaaggga acatcctccc catcatgcag agtattatgc
541 agaacctact ctccaaggat gtgctgtacc catcactgaa ggagatcaca gaaaagtatc
601 cagaatggtt gcagagtcat cgggaatctc tacctccaga gcagtttgaa aaatatcagg
661 agcagcacag cgtcatgtgc aaaatatgtg agcagtttga ggcagagacc cccacagaca
721 gtgaaaccac tcaaaaggct cgttttgaga tggtgctgga tcttatgcag cagctacaag
781 atttaggcca tcctccaaaa gagctggctg gagagatgcc tcctggcctc aactttgacc
841 tggatgccct caatctttcg ggcccaccag gtgccagtgg tgaacagtgt ctgatcatgt
901 gaaacacaac acgttttcct ctctgagtcc cagctatggg gaacatctgg agtcagcaga
961 accattggga cctgaggcag gagtgtcacc tgcgggagaa gtctgcccgc tgccctctgt
1021 catcccattc aagattgtgc cataccagct gaggtttttc ctctgtctct ctaggaatag
1081 ggtctgtttc acaggccatt tctgtgaacc ctactccatt gtggtttctg ccactatcaa
1141 agttccagct acctgcaagg tgaaggaagg catccctttt ggggcatgca ctttctttcc
1201 tttctcaaaa taatgttata tgtggccaca ctgatgttca cctttacgtc cagggtcttt
1261 gtgccttgtc tctactccct ctcttggatc tggggaggag gggcagagac ctgggactct
1321 gtatttctat agttctcctg gcagagcctt tgagaatggg gagaaacagc ctgggctggg
1381 gctacaggtc tgtcactatg ctctcttgcc ttcagacaga ccattctgaa ttctctaaag
1441 ggaaagggct tttgcatcta atcacaatag agttgaaaga gaggccttag gattctcctc
1501 tctctaggtg ctgagccctc acctccctgt tccaggctga gaactcaaat ggttaccctg
1561 cttcttccta caatgctgtg tgatatgggt gaacccagcc cctgaccttc ctctatcccc
1621 tgcccatcct cccttttacc tcctctcttt tttaaacacc tgtttatccc aacctttttg
1681 agctcaagct gtgataaaga agggcccatc ctatttcccc tcatctagtc catttacgat
1741 tctcactgac tccccgtctt cctggcagac acaaataaac ccagtgtcag gtctaggaaa
1801 ttaatggcta ttcttcccca gatacattct ggcttatttg agatacatga ttctcttaga
1861 atcctgtccc ttggttcagg aaagtagctt ggaaaaggag taggggtata gcttgggtcc
1921 cttttcctgc aaggccccat ggggcagaat ataataaata ttctgagtga ggaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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