LOCUS       BC000357                1982 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens sorting nexin 1, mRNA (cDNA clone MGC:8664
            IMAGE:2964409), complete cds.
ACCESSION   BC000357
VERSION     BC000357.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1982)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1982)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2000) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Nov 6, 2003 this sequence version replaced BC000357.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 1 Row: o Column: 7
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 23111033.
FEATURES             Location/Qualifiers
     source          1..1982
                     /db_xref="H-InvDB:HIT000029549"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:8664 IMAGE:2964409"
                     /tissue_type="Muscle, rhabdomyosarcoma"
                     /clone_lib="NIH_MGC_17"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1982
                     /gene="SNX1"
                     /gene_synonym="HsT17379"
                     /gene_synonym="MGC8664"
                     /gene_synonym="SNX1A"
                     /db_xref="GeneID:6642"
                     /db_xref="HGNC:HGNC:11172"
                     /db_xref="MIM:601272"
     CDS             11..1579
                     /gene="SNX1"
                     /gene_synonym="HsT17379"
                     /gene_synonym="MGC8664"
                     /gene_synonym="SNX1A"
                     /codon_start=1
                     /product="sorting nexin 1"
                     /protein_id="AAH00357.1"
                     /db_xref="GeneID:6642"
                     /db_xref="HGNC:HGNC:11172"
                     /db_xref="MIM:601272"
                     /translation="MASGGGGCSASERLPPPFPGLEPESEGAAGGSEPEAGDSDTEGE
                     DIFTGAAVVSKHQSPKITTSLLPINNGSKENGIHEEQDQEPQDLFADATVELSLDSTQ
                     NNQKKVLAKTLISLPPQEATNSSKPQPTYEELEEEEQEDQFDLTVGITDPEKIGDGMN
                     AYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIG
                     MTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRAVGT
                     QTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLV
                     NHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLL
                     AELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAK
                     DEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKYLETLLYSQQQLA
                     KYWEAFLPEAKAIS"
BASE COUNT          580 a          464 c          500 g          438 t
ORIGIN      
        1 gtggaagaag atggcgtcgg gtggtggtgg ctgtagcgct tcggagagac tgcctccgcc
       61 cttccccggc ctggagccgg agtccgaggg ggcggccggg ggatcagaac ccgaggctgg
      121 ggacagcgac accgaggggg aggacatttt caccggcgcc gcggtggtca gtaaacatca
      181 gtctccaaag ataactacat cccttcttcc catcaacaat ggctccaaag aaaatgggat
      241 ccatgaagaa caagaccaag agccacagga tctctttgca gatgccacag tggagctatc
      301 cttggacagc acacaaaata atcagaagaa ggtgctagcc aaaacactca tttctcttcc
      361 tcctcaggaa gccacaaatt cttcgaagcc ccagccaacc tatgaggagc tagaggaaga
      421 agaacaggag gatcaatttg atttgacagt cggtataact gatcctgaga agatagggga
      481 tggtatgaat gcatatgtag cctacaaagt tacaacacag acaagcttac cattgttcag
      541 aagcaaacag tttgcagtaa aaagaagatt tagtgacttt ctgggtcttt atgagaagct
      601 ttccgagaag cactctcaga atggcttcat tgtccctcca cccccggaga agagcctcat
      661 agggatgaca aaagtgaaag ttgggaagga agattcttct tctgcagaat ttcttgaaaa
      721 acggagggcc gctttagaaa ggtaccttca gaggattgta aatcatccta ccatgttaca
      781 ggaccctgac gtcagagagt tcttggaaaa agaagagctg ccacgtgccg tgggtaccca
      841 gacattgagt ggtgctggtc tcctcaagat gttcaacaaa gccacagatg ccgtcagcaa
      901 aatgaccatc aagatgaatg aatcagacat ttggtttgag gagaagctcc aggaggtaga
      961 gtgtgaggag cagcgcttac ggaaactgca tgctgttgta gaaactctag tcaaccatag
     1021 gaaagagcta gcgctgaaca cagcccagtt tgcaaagagt ctagccatgc ttgggagctc
     1081 tgaggacaac acggcattgt cacgggcact ctcccagctg gctgaggtgg aagaaaaaat
     1141 tgagcagctc caccaggaac aggccaacaa tgacttcttc ctccttgctg agctcctgag
     1201 tgactacatt cgcctcctgg ccatagtccg cgctgccttc gaccagcgca tgaagacatg
     1261 gcagcgctgg caggatgccc aagccacact gcagaagaag cgggaggccg aggctcggct
     1321 gctgtgggcc aacaagcctg ataagctgca gcaggccaag gacgagatcc tcgagtggga
     1381 gtctcgggtg actcaatatg aaagggactt cgagaggatt tcaacagtgg tccgaaaaga
     1441 agtgatacgg tttgagaaag agaaatccaa ggacttcaag aaccacgtga tcaagtacct
     1501 tgagacactc ctttactcac agcagcagct ggcaaagtac tgggaagcct tccttcctga
     1561 ggcaaaggcc atctcctaat ggaccaagga ccccagagcc cacctgtgtg acgctgcctt
     1621 tttatacact gtcctcctcc accttgatgg acccctagtg atgcatcctg cctaggctgg
     1681 acttaacccc ttcctccctg tccccacgac caactgtccc cagttactct aaccgttatt
     1741 tcatttagct tccatatata ttttcttacc taagagaata gtttcctgct ttaagcaaaa
     1801 gacctacaat aggtggtgga attatgggat ggggtggagt attgatataa atatataaat
     1861 acaaatgtat atttttcagg atgtggttta ggaactggga ataacgtttt ctgttactcc
     1921 tgatggtgcc atgaaaaggt tatgtaataa aatattttaa aatcaaaaaa aaaaaaaaaa
     1981 aa
//