LOCUS BC000281 2279 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens PCTAIRE protein kinase 3, mRNA (cDNA clone
IMAGE:3357514), partial cds.
ACCESSION BC000281
VERSION BC000281.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2279)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2279)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000281.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: m Column: 14.
FEATURES Location/Qualifiers
source 1..2279
/db_xref="H-InvDB:HIT000085820"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3357514"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2279
/gene="PCTK3"
/gene_synonym="PCTAIRE"
/gene_synonym="PCTAIRE3"
/db_xref="GeneID:5129"
/db_xref="MIM:169190"
CDS <1..854
/gene="PCTK3"
/gene_synonym="PCTAIRE"
/gene_synonym="PCTAIRE3"
/codon_start=3
/product="PCTK3 protein"
/protein_id="AAH00281.2"
/db_xref="GeneID:5129"
/db_xref="MIM:169190"
/translation="SLLKNLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGN
LMSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERGELKLADFGLARAKSVP
TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEMATGRPLFPGSTVKEELH
LIFRLLGTPTEETWPGVTAFSEFRTYSFPCYLPQPLINHAPRLDTDGIHLLSSLLLYE
SKSRMSAEAALSHSYFRSLGERVHQLEDTASIFSLKEIQLQKDPGYRGLAFQQPGRGK
NRRQSIF"
misc_feature 3..704
/gene="PCTK3"
/gene_synonym="PCTAIRE"
/gene_synonym="PCTAIRE3"
/note="S_TKc; Region: Serine/Threonine protein kinases,
catalytic domain"
/db_xref="CDD:smart00220"
BASE COUNT 459 a 765 c 601 g 454 t
ORIGIN
1 tgtctctgct gaagaacctg aagcacgcca atattgtgac cctgcatgac ctcatccaca
61 cagatcggtc cctcaccctg gtgtttgagt acctggacag tgacctgaag cagtatctgg
121 accactgtgg gaacctcatg agcatgcaca acgtcaagat tttcatgttc cagctgctcc
181 ggggcctcgc ctactgtcac caccgcaaga tcctgcaccg ggacctgaag ccccagaacc
241 tgctcatcaa cgagaggggg gagctgaagc tggccgactt tggactggcc agggccaagt
301 cagtgcccac aaagacttac tccaatgagg tggtgaccct gtggtacagg ccccccgatg
361 tgctgctggg atccacagag tactccaccc ccattgatat gtggggcgtg ggctgcatcc
421 actacgagat ggccacaggg aggcccctct tcccgggctc cacagtcaag gaggagctgc
481 acctcatctt tcgcctcctc gggaccccca cagaagagac gtggcccggc gtgaccgcct
541 tctctgagtt ccgcacctac agcttcccct gctacctccc gcagccgctc atcaaccacg
601 cgcccaggtt ggatacggat ggcatccacc tcctgagcag cctgctcctg tatgaatcca
661 agagtcgcat gtcagcagag gctgccctga gtcactccta cttccggtct ctgggagagc
721 gtgtgcacca gcttgaagac actgcctcca tcttctccct gaaggagatc cagctccaga
781 aggacccagg ctaccgaggc ttggccttcc agcagccagg acgagggaag aacaggcggc
841 agagcatctt ctgagccacg cccaccttgc tgtggccaag ggacaagaga tcacatggag
901 cacaaattcg ggtaggatgg agcctgtgtg gccctcggag gactgaagaa cgagggctga
961 cagccagcct ggaagaccgc ttggcagccc ttctggccac ggctgtttct tctttgtgct
1021 tcccgtgtgc ctccccagta gccctcacct gcataccaac ccctccttta cccacgttgg
1081 ggctggcata agctgcttcc ctgagaggac atgagggggg ggcggtcctc gtaccctctc
1141 ccaccctggt gtttgggcac ctgcgtggga tgcacacgga tgacagaatc aaggcgccag
1201 gatgggcact ctgccctgga tacaggctct accctcctcc cccaggacct gcctagtgcc
1261 agtttggtag tccccttttc tggccccttg gagcccacac acgtttcatc tttttcccct
1321 ctgagagcaa gaagagacat ggcatgttct ctgggaccct ggaatcctag gtacccacat
1381 gtgtgccaaa gcctacccca cctggcaggt gtcccacagc aacagaagga atagtagtcc
1441 ccactctttc catcagccct accctaccct cattccccga caccctctgg cttgaaccat
1501 ggctgagcag tgccggcata cgctttgctg gcatgcttgg atgcccagct gtgtccagag
1561 gtggcctggg accgccagtt gcacgcctgc cacctcagcc agcccccgcc cagctcatca
1621 gtctgaatgg agttgcctta aattggcagg tggtaccgta ctcactgccc ttggagctgt
1681 gaccggctcc tgcctgtcca ccccttcccg aggtggctcc tgcttacctt atcatcccag
1741 ggctctgatt agccaggcct ggtcagggtc ctggggacgg cacccagata tgcagagtca
1801 ccctgacact ggtgccgggc tgacctcagc tcccgaaggc tcgcacagcc tccccatcct
1861 tccttcccgg cccttgtggc tctgtccacc tgatcccaat accagcttcc cccagcccct
1921 gccaccccag agggcggcca cgacagggag aggtgtagat gccaccatct gagggagagg
1981 aacgtggaac aggagcaggc tctgatgctg agaggcttgc ctccgggggc tggaagcctg
2041 ggtggccggg gcccctgaag aaggctcccc tctgtatccc ccaggtctcc tcaacactgg
2101 gctgatcctg aatggcacag gccaagggga ggccagcctc gcctttctac ccaggccccc
2161 tgccctgccc acctcaggcc cccaccctcc gctcctcccc acggtactgt gaacgtcgtg
2221 tgactcagtg cagagacaga taatatattt aattcatgta caaaaaaaaa aaaaaaaaa
//