LOCUS BC000199 1234 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ganglioside-induced differentiation-associated protein 1-like 1, mRNA (cDNA clone MGC:3129 IMAGE:3352559), complete cds. ACCESSION BC000199 VERSION BC000199.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1234) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1234) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: e Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 30581159. FEATURES Location/Qualifiers source 1..1234 /db_xref="H-InvDB:HIT000029426" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3129 IMAGE:3352559" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1234 /gene="GDAP1L1" /gene_synonym="dJ881L22.1" /gene_synonym="dJ995J12.1.1" /db_xref="GeneID:78997" /db_xref="HGNC:HGNC:4213" CDS 54..1157 /gene="GDAP1L1" /gene_synonym="dJ881L22.1" /gene_synonym="dJ995J12.1.1" /codon_start=1 /product="ganglioside-induced differentiation-associated protein 1-like 1" /protein_id="AAH00199.1" /db_xref="GeneID:78997" /db_xref="HGNC:HGNC:4213" /translation="MATPNNLTPTNCSWWPISALESDAAKPAEAPDAPEAASPAHWPR ESLVLYHWTQSFSSQKVRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLGEEVPVII HRDNIISDYDQIIDYVERTFTGEHVVALMPEVGSLQHARVLQYRELLDALPMDAYTHG CILHPELTTDSMIPKYATAEIRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKI LEHDDVSYLKKILGELAMVLDQIEAELEKRKLENEGQKCELWLCGCAFTLADVLLGAT LHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDIHTTLLSAVIPNAFRLV KRKPPSFFGASFLMGSLGGMGYFAYWYLKKKYI" BASE COUNT 295 a 374 c 350 g 215 t ORIGIN 1 gagagccgcc gcgccggagc ctccttcttt cctgcctctg attccgggct gtcatggcga 61 cccccaacaa tctgaccccc accaactgca gctggtggcc catctccgcg ctggagagcg 121 atgcggccaa gccagcggag gcccccgacg ctcccgaggc ggccagcccc gcccattggc 181 ccagggagag cctggttctg taccactgga cccagtcctt cagctcgcag aaggtgcggc 241 tggtgatcgc cgagaagggc ctggtgtgcg aggagcggga cgtgagcctg ccacagagcg 301 agcacaagga gccctggttc atgcggctca acctgggcga ggaggtgccc gtcatcatcc 361 accgcgacaa catcatcagt gactatgacc agatcattga ctatgtggag cgcaccttca 421 caggagagca cgtggtggcc ctgatgcccg aggtgggcag cctgcagcac gcacgggtgc 481 tgcagtaccg ggagctgctg gacgcactgc ccatggatgc ctacacgcat ggctgcatcc 541 tgcatcccga gctcaccacc gactccatga tccccaagta cgccacggcc gagatccgca 601 gacatttagc caatgccacc acggacctca tgaaactgga ccatgaagag gagccccagc 661 tctccgagcc ctacctttct aaacaaaaga agctcatggc caagatcttg gagcatgatg 721 atgtgagcta cctgaagaag atcctcgggg aactggccat ggtgctggac cagattgagg 781 cggagctgga gaagaggaag ctggagaacg aggggcagaa atgcgagctg tggctctgtg 841 gctgtgcctt caccctcgct gatgtcctcc tgggagccac cctgcaccgc ctcaagttcc 901 tgggactgtc caagaaatac tgggaagatg gcagccggcc caacctgcag tccttctttg 961 agagggtcca gagacgcttt gccttccgga aagtcctggg tgacatccac accaccctgc 1021 tgtcggccgt catccccaat gctttccggc tggtcaagag gaaaccccca tccttcttcg 1081 gggcgtcctt cctcatgggc tccctgggtg ggatgggcta ctttgcctac tggtacctca 1141 agaaaaaata catctagggc caggcctggg gcttggtgtc tgaaaaaaaa aaaaaaaaaa 1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //