LOCUS BC000159 1543 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens keratin 17, mRNA (cDNA clone MGC:5200 IMAGE:2986100),
complete cds.
ACCESSION BC000159
VERSION BC000159.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1543)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1543)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On May 25, 2001 this sequence version replaced BC000159.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557700.
FEATURES Location/Qualifiers
source 1..1543
/db_xref="H-InvDB:HIT000029394"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5200 IMAGE:2986100"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1543
/gene="KRT17"
/gene_synonym="K17"
/gene_synonym="PC"
/gene_synonym="PC2"
/db_xref="GeneID:3872"
/db_xref="HGNC:HGNC:6427"
/db_xref="MIM:148069"
CDS 51..1349
/gene="KRT17"
/gene_synonym="K17"
/gene_synonym="PC"
/gene_synonym="PC2"
/codon_start=1
/product="keratin 17"
/protein_id="AAH00159.2"
/db_xref="GeneID:3872"
/db_xref="HGNC:HGNC:6427"
/db_xref="MIM:148069"
/translation="MTTSIRQFTSSSSIKGSSGLGGGSSRTSCRLSGGLGAGSCRLGS
AGGLGSTLGGSSYSSCYSFGSGGGYGSSFGGVDGLLAGGEKATMQNLNDRLASYLDKV
RALEEANTELEVKIRDWYQRQAPGPARDYSQYYRTIEELQNKILTATVDNANILLQID
NARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARADLEMQIENLKEELAYL
KKNHEEEMNALRGQVGGEINVEMDAAPGVDLSRILNEMRDQYEKMAEKNRKDAEDWFF
SKTEELNREVATNSELVQSGKSEISELRRTMQALEIELQSQLSMKASLEGNLAETENR
YCVQLSQIQGLIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIATYRRLLEGED
AHLTQYKKEPVTTRQVRTIVEEVQDGKVISSREQVHQTTR"
BASE COUNT 361 a 460 c 469 g 253 t
ORIGIN
1 ctctcctctc cagcccttct cctgtgtgcc tgcctcctgc cgccgccacc atgaccacct
61 ccatccgcca gttcacctcc tccagctcca tcaagggctc ctccggcctg gggggcggct
121 cgtcccgcac ctcctgccgg ctgtctggcg gcctgggtgc cggctcctgc aggctgggat
181 ctgctggcgg cctgggcagc accctcgggg gtagcagcta ctccagctgc tacagctttg
241 gctctggtgg tggctatggc agcagctttg ggggtgttga tgggctgctg gctggaggtg
301 agaaggccac catgcagaac ctcaatgacc gcctggcctc ctacctggac aaggtgcgtg
361 ccctggagga ggccaacact gagctggagg tgaagatccg tgactggtac cagaggcagg
421 ccccggggcc cgcccgtgac tacagccagt actacaggac aattgaggag ctgcagaaca
481 agatcctcac agccaccgtg gacaatgcca acatcctgct acagattgac aatgcccgtc
541 tggctgctga tgacttccgc accaagtttg agacagagca ggccctgcgc ctgagtgtgg
601 aggccgacat caatggcctg cgcagggtgc tggatgagct gaccctggcc agagccgacc
661 tggagatgca gattgagaac ctcaaggagg agctggccta cctgaagaag aaccacgagg
721 aggagatgaa cgccctgcga ggccaggtgg gtggtgagat caatgtggag atggacgctg
781 ccccaggcgt ggacctgagc cgcatcctca acgagatgcg tgaccagtat gagaagatgg
841 cagagaagaa ccgcaaggat gccgaggatt ggttcttcag caagacagag gaactgaacc
901 gcgaggtggc caccaacagt gagctggtgc agagtggcaa gagtgagatc tcggagctcc
961 ggcgcaccat gcaggccttg gagatagagc tgcagtccca gctcagcatg aaagcatccc
1021 tggagggcaa cctggcggag acagagaacc gctactgcgt gcagctgtcc cagatccagg
1081 ggctgattgg cagcgtggag gagcagctgg cccagcttcg ctgcgagatg gagcagcaga
1141 accaggaata caaaatcctg ctggatgtga agacgcggct ggagcaggag attgccacct
1201 accgccgcct gctggaggga gaggatgccc acctgactca gtacaagaaa gaaccggtga
1261 ccacccgtca ggtgcgtacc attgtggaag aggtccagga tggcaaggtc atctcctccc
1321 gcgagcaggt ccaccagacc acccgctgag gactcagcta ccccggccgg ccacccagga
1381 ggcagggagg cagccgcccc atctgcccca cagtctccgg cctctccagc ctcagccccc
1441 tgcttcagtc ccttccccat gcttccttgc ctgatgacaa taaagcttgt tgactcagct
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//