LOCUS BC000144 2383 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens capping protein (actin filament) muscle Z-line, alpha
1, mRNA (cDNA clone MGC:5240 IMAGE:3047937), complete cds.
ACCESSION BC000144
VERSION BC000144.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2383)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2383)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: d Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453596.
FEATURES Location/Qualifiers
source 1..2383
/db_xref="H-InvDB:HIT000029380"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5240 IMAGE:3047937"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2383
/gene="CAPZA1"
/gene_synonym="CAPPA1"
/gene_synonym="CAPZ"
/gene_synonym="CAZ1"
/db_xref="GeneID:829"
/db_xref="HGNC:HGNC:1488"
/db_xref="MIM:601580"
CDS 18..878
/gene="CAPZA1"
/gene_synonym="CAPPA1"
/gene_synonym="CAPZ"
/gene_synonym="CAZ1"
/codon_start=1
/product="capping protein (actin filament) muscle Z-line,
alpha 1"
/protein_id="AAH00144.1"
/db_xref="GeneID:829"
/db_xref="HGNC:HGNC:1488"
/db_xref="MIM:601580"
/translation="MADFDDRVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDN
LLREGAAHAFAQYNMDQFTPVKIEGYEDQVLITEHGDLGNSRFLDPRNKISFKFDHLR
KEASDPQPEEADGGLKSWRESCDSALRAYVKDHYSNGFCTVYAKTIDGQQTIIACIES
HQFQPKNFWNGRWRSEWKFTITPPTAQVVGVLKIQVHYYEDGNVQLVSHKDVQDSLTV
SNEAQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILS
YKIGKEMQNA"
BASE COUNT 731 a 446 c 452 g 754 t
ORIGIN
1 ggccagaaca gcccaagatg gccgacttcg atgatcgtgt gtcggatgag gagaaggtac
61 gcatagctgc taaattcatc actcatgcac ccccagggga atttaatgaa gtattcaatg
121 acgttcggct actacttaat aatgacaatc tcctcaggga aggggcagca catgcatttg
181 cccagtataa catggatcag ttcacgcctg tgaagataga aggatatgaa gatcaggtct
241 taattacaga gcacggtgac ctgggtaata gcagattttt agatccaaga aacaaaattt
301 cctttaaatt tgaccactta cggaaagaag caagtgaccc ccagccagaa gaagcagatg
361 gaggtctgaa gtcttggaga gaatcctgtg acagtgcttt aagagcctat gtgaaagacc
421 attattccaa cggcttctgt actgtttatg ctaaaactat cgatgggcaa cagactatta
481 ttgcatgtat tgaaagccac cagtttcagc ctaaaaactt ctggaatggt cgttggagat
541 cagagtggaa gttcaccatc acaccaccta cagcccaggt ggttggcgtg cttaagattc
601 aggttcacta ttatgaagat ggcaatgttc agttggttag tcataaagat gtacaggatt
661 cactaactgt ttcgaatgaa gcccaaactg ccaaggagtt tattaaaatc atagagaatg
721 cagaaaatga gtatcagaca gcaattagtg aaaactatca aacaatgtca gataccacat
781 tcaaggcctt gcgccggcag cttccagtta cccgcaccaa aatcgactgg aacaagatac
841 tcagctacaa gattggcaaa gaaatgcaga atgcttaaag gctgaatgta ggattcttca
901 gtatgtggaa agacaaggat tcaacgtgtg gtcatatgat aaataagtga tttataaaca
961 agagtgatat tttgctaggg ctttcaaagt taaccggttt tctagcctca tggaatactg
1021 ttgaacctat agcgttgtct tgattctttt gtgttctctg ccttgtaatt ttctgttact
1081 gctatatcta cgtgtaaatc tttttttctt tttttttttt tttttttggt taattctgcc
1141 acatttaatg ttggtgagag agtgatctat cctaatgaca ttttactgtt taaaaaagtt
1201 tcctagccat gaagccctgc tactgattta gacaaggtat tatggtcatt actttgtacc
1261 cctatccttc caagcacttc tggtacttca gtcgttttta ctgatccacc aacacctaaa
1321 gaggctatgc tacagtctct agctaaatgg aagacacatt catccttctc cctctgactg
1381 ctttgatcat catttattgc atctcataac taattttcta aagtttggat tgggactttt
1441 caggtccttt ttggagggca aaggaagtgc cagcttctct ggggaacttg tttttaaatc
1501 caaagacttg aaccacattc cctgcacatg aacatgtttg cttttatccc ttctctcatt
1561 gtctccttcc catcttagta ccattgtagt tataaacatc tgcatttttt agaagcattt
1621 tacccattta tttttttaaa cattcaagaa ctgctgacgt actgtggatg tagagtataa
1681 aacttgaaaa atgcagatgt tgaaggaata ataggtatct tgtgctttaa tactttatgg
1741 caggattgta ctataagcaa atgaattaaa cagctatgta aatcataaag aaaaactaaa
1801 aatgaaccaa agtgaaagga taacttccag gcagtatctt tctattgtaa cctgttattt
1861 aaggaaatac tagtgatttc ttctaaatag gatgtaaaac ttctttcaaa ttactcttcc
1921 tcagtcctgc ctgccaagaa ctcaagtgta actgtgataa aataaccttt cccaggtata
1981 ttggcaggta tgtgtgtaat ctcagaatac acaggtgaca tagatatgat atgacaactg
2041 gtaatggtgg attcatttac attgtttaca cttctatgac caggccttaa gggaaggtca
2101 gttttttaaa aaaccaagta gtgtcttcct acctatctcc agatacatgt caaaaaaaga
2161 aaggtgtttg tgcttccgtt ttgtttctgc tcagtaatat agtcaagcaa gtttgttcca
2221 ggtgacccat tgagctgtgt atgcattttt gtttatttca ataaaatata tttgtattat
2281 ttgtccttca tactatccat ccataccaca ctatcttctg tatcaggtag tctaatagaa
2341 atatacctgt tttgttctaa aattgaaaaa aaaaaaaaaa aaa
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