LOCUS BC000121 2292 bp mRNA linear HUM 06-JAN-2006 DEFINITION Homo sapiens chromosome 17 open reading frame 53, mRNA (cDNA clone MGC:3130 IMAGE:3352851), complete cds. ACCESSION BC000121 VERSION BC000121.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2292) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2292) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: g Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31543178. FEATURES Location/Qualifiers source 1..2292 /db_xref="H-InvDB:HIT000029361" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3130 IMAGE:3352851" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2292 /gene="C17orf53" /gene_synonym="FLJ11594" /gene_synonym="MGC3130" /db_xref="GeneID:78995" /db_xref="HGNC:HGNC:28460" /db_xref="IMGT/GENE-DB:28460" /db_xref="MIM:28460" CDS 122..1687 /gene="C17orf53" /gene_synonym="FLJ11594" /gene_synonym="MGC3130" /codon_start=1 /product="C17orf53 protein" /protein_id="AAH00121.1" /db_xref="GeneID:78995" /db_xref="HGNC:HGNC:28460" /db_xref="IMGT/GENE-DB:28460" /db_xref="MIM:28460" /translation="MACSLQKLFAVEEEFEDEDFLSAVEDAENRFTGSLPVNAGRLRP VSSRPQETVQAQSSRLLLLHPTAPSEALGLPDLDLCLPASSTPSADSRPSCIGAAPLR PVSTSSSWIGNQRRVTVTEVLREPARPQSSALHPLLTFESQQQQVGGFEGPEQDEFDK VLASMELEEPGMELECGVSSEAIPILPAQQREGSVLAKKARVVDLSGSCQKGPVPAIH KAGIMSAQDESLDPVIQCRTPRPPLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQ ALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGL FPRIPLQPQAPVSSIGSPVGTPKGPQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTR AKTRRFPGPAGILPHQAALKQLPRNKVPNMAVMIKSLTRSTMDASVVFKDPTGEMQGT VHRLLLETCQNELKPGSVLLLKQIGVFSPSLRNHYLNVTPNNLVHIYSPDSGDGSFLK PSQPFPKMTWMDS" BASE COUNT 494 a 706 c 592 g 500 t ORIGIN 1 gcccggaagc actgtccctc ggagtccgag acttccacct gggtcgtgtc caaggccccg 61 gcgactcccc ggactcgggg tgccgggcca acctccccgc cgaggcccac ccgccgtcgc 121 tatggcgtgc agtttgcaga agctgtttgc tgtggaagag gagtttgaag atgaggattt 181 cttgtctgct gtggaggatg cagagaaccg gtttactggc tcactgcctg tgaatgctgg 241 gcgcctgaga cctgtctctt ctaggccaca ggagactgtg caggcacagt cctccaggct 301 gctgctgtta caccccactg ctccctcaga ggctttgggc ctgccagact tggacctctg 361 cctccctgcc tccagcacgc ccagtgctga cagccgtcca tcatgcatag gagcagctcc 421 cctaaggcct gtctctactt ccagcagctg gattggcaat cagagaagag tgacagtgac 481 agaagtgctc agagagccag caagacctca gtcctcagcc ttacaccccc tactcacctt 541 tgagagccaa cagcagcaag ttggtggctt tgaggggcct gaacaagacg aatttgataa 601 agtcctggca agcatggagt tggaggagcc tggcatggag ctggaatgtg gagtcagcag 661 tgaggccata ccaatcctgc ctgcccagca gcgggagggt tcagtattgg ctaaaaaagc 721 ccgggtagtt gatctgagtg gatcttgcca gaaggggcct gtgcctgcca tccacaaagc 781 gggtatcatg tccgcccagg atgagtctct agatcctgtc atccaatgta ggactccacg 841 accccccttg agacctggtg ctgtgggtca ccttcctgtt ccaactgcct taacagttcc 901 cactcagcaa ctccactggg aagtctgtcc gcaacgctcc cctgttcaag cacttcagcc 961 tctccaagct gctagaggga ccattcagag cagccctcaa aatcgtttcc cttgtcagcc 1021 attccagtct ccaagttcct ggttaagtgg caaagctcat ttacccagac ctcgaactcc 1081 caactcaagc tgttctactc cctcaaggac tagctctgga ttatttcctc ggataccctt 1141 acaaccgcaa gctccagtgt cttccattgg gtctcctgtt ggtaccccaa aaggtcccca 1201 gggagctctg cagacaccca tagtcaccaa ccacctggtg cagctagtca ctgctgccag 1261 ccggacaccc cagcagccca cccatccctc cacccgagcc aaaactcgcc gtttccctgg 1321 cccagctggg atcctgcctc accaggcagc cctgaagcag cttcctagga acaaggtccc 1381 caacatggcg gtgatgatca agtccctgac tcggagcaca atggacgcca gtgtggtttt 1441 caaggacccc acgggagaga tgcaggggac ggtgcacagg ttgctgctgg agacgtgcca 1501 gaatgagctg aagcctggct cagtgctgct gctgaagcag attggagtgt tttctccttc 1561 acttcgaaat cactacctca acgtgacacc caacaacctg gtccatattt acagcccgga 1621 ttctggggat gggagcttcc tcaagccatc tcagcccttc cccaagatga cctggatgga 1681 ctcctgagtg agcttcctga agacttcttc tgtgggacca gtagttgaga ctgccccaac 1741 gcaggacaac ccaccatgag caggcagctc tgggcacgtg tctggtcaca tccaaggggg 1801 agaagaaggc cagcatgatt ggagagtgga cacagccggg gggcttctgt ggttgctccc 1861 accctgggtg ttttccctga gagccccctc atctctgcgc tgccctcact ttgggccttc 1921 ctttgccgtt ggcaccagaa tccggccgga gactggctct ccagccaaca agaaaggcct 1981 gtcacccttg ccttgggtgt ccctctcctg cctcagctta attttagagg atattgggcc 2041 tggttttctt gtcccttcat accctagtcc ctggacagct gaggagatga aaggagccac 2101 accacaacaa tggcggcctg cccctccaca caggggagaa gcacgctcag gcttcctctg 2161 ctttgtctct tcagacctgt ggttgctctg ctcatccatg cccaaggttc ccaggtgcag 2221 gacagaggtg tggcctattg taccttgttc tgaaataaag catctcctgc ttaaaaaaaa 2281 aaaaaaaaaa aa //