LOCUS AY319765 3256 bp DNA linear BCT 25-JUL-2016 DEFINITION Escherichia coli cadBA operon, partial sequence. ACCESSION AY319765 VERSION AY319765.1 KEYWORDS . SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 3256) AUTHORS Casalino,M., Latella,M.C., Prosseda,G. and Colonna,B. TITLE CadC is the preferential target of a convergent evolution driving enteroinvasive Escherichia coli toward a lysine decarboxylase-defective phenotype JOURNAL Infect. Immun. 71 (10), 5472-5479 (2003) PUBMED 14500464 REFERENCE 2 (bases 1 to 3256) AUTHORS Casalino,M., Latella,M.C., Prosseda,G. and Colonna,B. TITLE Direct Submission JOURNAL Submitted (10-JUN-2003) Cellular and Developmental Biology, University of Rome 'La Sapienza', via dei sardi 70, Rome 00185, Italy FEATURES Location/Qualifiers source 1..3256 /organism="Escherichia coli" /mol_type="genomic DNA" /strain="6.81" /db_xref="taxon:562" /note="enteroinvasive; EIEC" gene <1..>3256 /gene="cadBA operon" gene <1..1040 /gene="cadB" CDS <1..1040 /gene="cadB" /experiment="experimental evidence, no additional details recorded" /note="lysine/cadaverine antiporter" /codon_start=3 /transl_table=11 /product="CadB" /protein_id="AAQ16630.1" /translation="IGITAVSYLSTFFPVLNDPVPAGIACIAIVWVFTFVNMLGGTWV SRLTTIGLVLVLIPVVMTAIVGWHWFDAATYAANWNTADTTDGHAIIKSILLCLWAFV GVESAAVSTGMVKNPKRTVPLATMLGTGLAGIVYIAATQVLSGMYPSSVMAASGAPFA ISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGEVDSNG IPKKGLLLAAVKMTALMILITLMNSAGGKASDLFGELTGIAVLLTMLPYFYSCVDLIR FEGVNIRNFVSLICSVLGCVFCFIALMGASSFELAGTFIVSLIILMFYARKMHERQSH SMDNHTASNAH" gene 1081..>3256 /gene="cadA" CDS 1081..>3256 /gene="cadA" /inference="non-experimental evidence, no additional details recorded" /note="lysine decarboxylase; similar to lysine decarboxylase encoded by GenBank Accession Number AF447814; may be longer than other lysine decarboxylases" /codon_start=1 /transl_table=11 /product="CadA" /protein_id="AAQ16631.1" /translation="MCWEGPFLPGDMTMNVIAILNHMGVYFKEEPIRELHRALERLNF QIVYPNDRDDLLKLIENNARLCGVIFDWYKYNLELCEEISKMNENLPLYAFANTYSTL DVSLNDLRLQISFFEYALGAAEDIANKIKQTTDEYINTILPPLTKALFKYVREGKYTF CTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEQYIA RVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFR PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKT LDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQTSMIH VKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRK EIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLT PGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIDIDKTKALSLLPAL TDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQELAQNIHKLIVHHNLPDLMYRAFE VLPTMVMTPYAAFQKELHGMTEEVYLDEMVGRINANMILPYPPGVPLVMPGEMITEES RPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKEE" BASE COUNT 800 a 803 c 773 g 880 t ORIGIN 1 cgattggtat taccgcggta tcttatcttt ccaccttctt cccagtatta aatgatcctg 61 ttccggcggg tatcgcctgt attgctatcg tctgggtatt tacctttgta aatatgctcg 121 gcggtacttg ggtaagccgt ttaaccacta ttggtctggt gctggttctt attcctgtgg 181 tgatgactgc tattgttggc tggcattggt ttgatgcggc aacttatgca gctaactgga 241 atactgcgga taccactgat ggtcatgcga tcattaaaag tattctgctc tgcctgtggg 301 ccttcgtggg tgttgaatcc gcagcagtaa gtactggtat ggttaaaaac ccgaaacgta 361 ccgttccgct ggcaaccatg ctgggtactg gtttagcagg tattgtttac atcgctgcga 421 ctcaggtgct ttccggtatg tatccatctt ctgtaatggc agcttccggt gctccgtttg 481 caatcagtgc ttcaaccatc ctcggtaact gggctgcgcc gctggtttct gcattcaccg 541 cctttgcgtg cctgacttct ctgggctcct ggatgatgtt ggtaggccag gcaggtgtac 601 gtgccgctaa cgacggtaac ttcccgaaag tttatggtga agtcgacagc aacggtattc 661 cgaaaaaagg tctgctgctg gctgcagtga aaatgactgc cctgatgatc ctcatcactc 721 tgatgaactc tgccggtggt aaagcatctg acctgttcgg tgaactgacc ggtatcgcag 781 tactgctgac tatgctgccg tacttctact cttgcgttga cctgattcgt tttgaaggcg 841 ttaacatccg caactttgtc agcctgatct gctctgtact gggttgcgtg ttctgcttca 901 tcgcgctgat gggcgcaagc tccttcgagc tggcaggtac cttcatcgtc agcctgatta 961 tcctgatgtt ctacgctcgc aaaatgcacg agcgccagag ccactcaatg gataaccaca 1021 ccgcgtctaa cgcacattaa ttaaaagtat tttccgaggc tcctcctttc attttgtccc 1081 atgtgttggg aggggccttt tttacctgga gatatgacta tgaacgttat tgcaatattg 1141 aatcacatgg gggtttattt taaagaagaa cccatccgtg aacttcatcg cgcgcttgaa 1201 cgtctgaact tccagattgt ttacccgaac gaccgtgacg acttattaaa actgatcgaa 1261 aacaatgcgc gtctgtgcgg cgttattttt gactggtata aatataatct cgagctgtgc 1321 gaagaaatta gcaaaatgaa cgagaacctg ccgttgtacg cgttcgctaa tacgtattcc 1381 actctcgatg taagcctgaa tgacctgcgt ttacagatta gcttctttga atatgcgctg 1441 ggtgctgctg aagatattgc taataagatc aagcagacca ctgacgaata tatcaacact 1501 attctgcctc cgctgactaa agcactgttt aaatatgttc gtgaaggtaa atatactttc 1561 tgtactcctg gtcacatggg cggtactgca tttcagaaaa gcccggtagg gagcctgttc 1621 tatgatttct ttggtccgaa taccatgaaa tctgatattt ccatttcagt atctgaactg 1681 ggttctctgc tggatcacag tggtccacac aaagaagcag aacagtatat cgctcgcgtc 1741 tttaacgcag accgcagcta catggtgacc aacggtactt ccactgcgaa caaaattgtt 1801 ggcatgtact ctgctccggc aggcagcacc attctgattg accgtaactg ccacaaatcg 1861 ctgacccacc tgatgatgat gagcgatgtt acgccaatct atttccgccc gacccgtaac 1921 gcttacggta ttcttggtgg tatcccacag agtgaattcc agcacgctac cattgctaag 1981 cgcgtgaaag aaacaccaaa cgcaacctgg ccggtacatg ctgtaattac caactctacc 2041 tatgatggtc tgctgtacaa caccgacttc atcaagaaaa cactggatgt gaaatccatc 2101 cactttgact ccgcgtgggt gccttacacc aacttctcac cgatttacga aggtaaatgc 2161 ggtatgagcg gtggccgtgt agaagggaaa gtgatttacg aaacccagtc cactcacaaa 2221 ctgctggcgg cgttctctca gacttccatg atccacgtta aaggtgacgt aaacgaagaa 2281 acctttaacg aagcctacat gatgcacacc accacttctc ctcactacgg tatcgtggcg 2341 tccactgaaa ccgctgcggc gatgatgaaa ggcaatgcag gtaaacgtct gatcaacggt 2401 tccattgaac gtgcgatcaa attccgtaaa gagatcaaac gtctgagaac ggaatctgat 2461 ggctggttct ttgatgtatg gcagccggat catatcgata cgactgaatg ctggccgctg 2521 cgttctgaca gcacctggca cggcttcaaa aacatcgata acgagcacat gtatcttgac 2581 ccgatcaaag tcaccctgct gactccgggg atggaaaaag acggcaccat gagcgacttt 2641 ggtattccgg ccagcatcgt ggcgaaatac ctcgacgaac atggcatcgt tgttgagaaa 2701 accggtccgt ataacctgct gttcctgttc agcatcgata tcgataagac caaagcactg 2761 agcctgctgc ctgctctgac tgacttcaaa cgtgcgttcg acctgaacct gcgtgtgaaa 2821 aacatgctgc cgtctctgta tcgtgaagat cctgaattct atgaaaacat gcgtattcag 2881 gaactggctc agaatatcca caaactgatt gttcaccaca atctgccgga tctgatgtat 2941 cgcgcatttg aagtgctgcc gacaatggta atgactccgt atgctgcgtt ccagaaagag 3001 ctgcacggta tgaccgaaga agtttacctc gacgaaatgg taggtcgtat taacgccaat 3061 atgatccttc catatccgcc gggagttcct ctggtaatgc cgggtgaaat gatcaccgaa 3121 gaaagccgtc cggttctgga gttcctgcag atgctgtgtg aaatcggcgc tcactatccg 3181 ggctttgaaa ccgatattca cggtgcatac cgtcaggctg atggccgcta taccgttaag 3241 gtattgaaag aagaaa //