LOCUS       AY319765                3256 bp    DNA     linear   BCT 25-JUL-2016
DEFINITION  Escherichia coli cadBA operon, partial sequence.
ACCESSION   AY319765
VERSION     AY319765.1
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3256)
  AUTHORS   Casalino,M., Latella,M.C., Prosseda,G. and Colonna,B.
  TITLE     CadC is the preferential target of a convergent evolution driving
            enteroinvasive Escherichia coli toward a lysine
            decarboxylase-defective phenotype
  JOURNAL   Infect. Immun. 71 (10), 5472-5479 (2003)
   PUBMED   14500464
REFERENCE   2  (bases 1 to 3256)
  AUTHORS   Casalino,M., Latella,M.C., Prosseda,G. and Colonna,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUN-2003) Cellular and Developmental Biology,
            University of Rome 'La Sapienza', via dei sardi 70, Rome 00185,
            Italy
FEATURES             Location/Qualifiers
     source          1..3256
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="6.81"
                     /db_xref="taxon:562"
                     /note="enteroinvasive; EIEC"
     gene            <1..>3256
                     /gene="cadBA operon"
     gene            <1..1040
                     /gene="cadB"
     CDS             <1..1040
                     /gene="cadB"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="lysine/cadaverine antiporter"
                     /codon_start=3
                     /transl_table=11
                     /product="CadB"
                     /protein_id="AAQ16630.1"
                     /translation="IGITAVSYLSTFFPVLNDPVPAGIACIAIVWVFTFVNMLGGTWV
                     SRLTTIGLVLVLIPVVMTAIVGWHWFDAATYAANWNTADTTDGHAIIKSILLCLWAFV
                     GVESAAVSTGMVKNPKRTVPLATMLGTGLAGIVYIAATQVLSGMYPSSVMAASGAPFA
                     ISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGEVDSNG
                     IPKKGLLLAAVKMTALMILITLMNSAGGKASDLFGELTGIAVLLTMLPYFYSCVDLIR
                     FEGVNIRNFVSLICSVLGCVFCFIALMGASSFELAGTFIVSLIILMFYARKMHERQSH
                     SMDNHTASNAH"
     gene            1081..>3256
                     /gene="cadA"
     CDS             1081..>3256
                     /gene="cadA"
                     /inference="non-experimental evidence, no additional
                     details recorded"
                     /note="lysine decarboxylase; similar to lysine
                     decarboxylase encoded by GenBank Accession Number
                     AF447814; may be longer than other lysine decarboxylases"
                     /codon_start=1
                     /transl_table=11
                     /product="CadA"
                     /protein_id="AAQ16631.1"
                     /translation="MCWEGPFLPGDMTMNVIAILNHMGVYFKEEPIRELHRALERLNF
                     QIVYPNDRDDLLKLIENNARLCGVIFDWYKYNLELCEEISKMNENLPLYAFANTYSTL
                     DVSLNDLRLQISFFEYALGAAEDIANKIKQTTDEYINTILPPLTKALFKYVREGKYTF
                     CTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEQYIA
                     RVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFR
                     PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKT
                     LDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQTSMIH
                     VKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRK
                     EIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLT
                     PGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIDIDKTKALSLLPAL
                     TDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQELAQNIHKLIVHHNLPDLMYRAFE
                     VLPTMVMTPYAAFQKELHGMTEEVYLDEMVGRINANMILPYPPGVPLVMPGEMITEES
                     RPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKEE"
BASE COUNT          800 a          803 c          773 g          880 t
ORIGIN      
        1 cgattggtat taccgcggta tcttatcttt ccaccttctt cccagtatta aatgatcctg
       61 ttccggcggg tatcgcctgt attgctatcg tctgggtatt tacctttgta aatatgctcg
      121 gcggtacttg ggtaagccgt ttaaccacta ttggtctggt gctggttctt attcctgtgg
      181 tgatgactgc tattgttggc tggcattggt ttgatgcggc aacttatgca gctaactgga
      241 atactgcgga taccactgat ggtcatgcga tcattaaaag tattctgctc tgcctgtggg
      301 ccttcgtggg tgttgaatcc gcagcagtaa gtactggtat ggttaaaaac ccgaaacgta
      361 ccgttccgct ggcaaccatg ctgggtactg gtttagcagg tattgtttac atcgctgcga
      421 ctcaggtgct ttccggtatg tatccatctt ctgtaatggc agcttccggt gctccgtttg
      481 caatcagtgc ttcaaccatc ctcggtaact gggctgcgcc gctggtttct gcattcaccg
      541 cctttgcgtg cctgacttct ctgggctcct ggatgatgtt ggtaggccag gcaggtgtac
      601 gtgccgctaa cgacggtaac ttcccgaaag tttatggtga agtcgacagc aacggtattc
      661 cgaaaaaagg tctgctgctg gctgcagtga aaatgactgc cctgatgatc ctcatcactc
      721 tgatgaactc tgccggtggt aaagcatctg acctgttcgg tgaactgacc ggtatcgcag
      781 tactgctgac tatgctgccg tacttctact cttgcgttga cctgattcgt tttgaaggcg
      841 ttaacatccg caactttgtc agcctgatct gctctgtact gggttgcgtg ttctgcttca
      901 tcgcgctgat gggcgcaagc tccttcgagc tggcaggtac cttcatcgtc agcctgatta
      961 tcctgatgtt ctacgctcgc aaaatgcacg agcgccagag ccactcaatg gataaccaca
     1021 ccgcgtctaa cgcacattaa ttaaaagtat tttccgaggc tcctcctttc attttgtccc
     1081 atgtgttggg aggggccttt tttacctgga gatatgacta tgaacgttat tgcaatattg
     1141 aatcacatgg gggtttattt taaagaagaa cccatccgtg aacttcatcg cgcgcttgaa
     1201 cgtctgaact tccagattgt ttacccgaac gaccgtgacg acttattaaa actgatcgaa
     1261 aacaatgcgc gtctgtgcgg cgttattttt gactggtata aatataatct cgagctgtgc
     1321 gaagaaatta gcaaaatgaa cgagaacctg ccgttgtacg cgttcgctaa tacgtattcc
     1381 actctcgatg taagcctgaa tgacctgcgt ttacagatta gcttctttga atatgcgctg
     1441 ggtgctgctg aagatattgc taataagatc aagcagacca ctgacgaata tatcaacact
     1501 attctgcctc cgctgactaa agcactgttt aaatatgttc gtgaaggtaa atatactttc
     1561 tgtactcctg gtcacatggg cggtactgca tttcagaaaa gcccggtagg gagcctgttc
     1621 tatgatttct ttggtccgaa taccatgaaa tctgatattt ccatttcagt atctgaactg
     1681 ggttctctgc tggatcacag tggtccacac aaagaagcag aacagtatat cgctcgcgtc
     1741 tttaacgcag accgcagcta catggtgacc aacggtactt ccactgcgaa caaaattgtt
     1801 ggcatgtact ctgctccggc aggcagcacc attctgattg accgtaactg ccacaaatcg
     1861 ctgacccacc tgatgatgat gagcgatgtt acgccaatct atttccgccc gacccgtaac
     1921 gcttacggta ttcttggtgg tatcccacag agtgaattcc agcacgctac cattgctaag
     1981 cgcgtgaaag aaacaccaaa cgcaacctgg ccggtacatg ctgtaattac caactctacc
     2041 tatgatggtc tgctgtacaa caccgacttc atcaagaaaa cactggatgt gaaatccatc
     2101 cactttgact ccgcgtgggt gccttacacc aacttctcac cgatttacga aggtaaatgc
     2161 ggtatgagcg gtggccgtgt agaagggaaa gtgatttacg aaacccagtc cactcacaaa
     2221 ctgctggcgg cgttctctca gacttccatg atccacgtta aaggtgacgt aaacgaagaa
     2281 acctttaacg aagcctacat gatgcacacc accacttctc ctcactacgg tatcgtggcg
     2341 tccactgaaa ccgctgcggc gatgatgaaa ggcaatgcag gtaaacgtct gatcaacggt
     2401 tccattgaac gtgcgatcaa attccgtaaa gagatcaaac gtctgagaac ggaatctgat
     2461 ggctggttct ttgatgtatg gcagccggat catatcgata cgactgaatg ctggccgctg
     2521 cgttctgaca gcacctggca cggcttcaaa aacatcgata acgagcacat gtatcttgac
     2581 ccgatcaaag tcaccctgct gactccgggg atggaaaaag acggcaccat gagcgacttt
     2641 ggtattccgg ccagcatcgt ggcgaaatac ctcgacgaac atggcatcgt tgttgagaaa
     2701 accggtccgt ataacctgct gttcctgttc agcatcgata tcgataagac caaagcactg
     2761 agcctgctgc ctgctctgac tgacttcaaa cgtgcgttcg acctgaacct gcgtgtgaaa
     2821 aacatgctgc cgtctctgta tcgtgaagat cctgaattct atgaaaacat gcgtattcag
     2881 gaactggctc agaatatcca caaactgatt gttcaccaca atctgccgga tctgatgtat
     2941 cgcgcatttg aagtgctgcc gacaatggta atgactccgt atgctgcgtt ccagaaagag
     3001 ctgcacggta tgaccgaaga agtttacctc gacgaaatgg taggtcgtat taacgccaat
     3061 atgatccttc catatccgcc gggagttcct ctggtaatgc cgggtgaaat gatcaccgaa
     3121 gaaagccgtc cggttctgga gttcctgcag atgctgtgtg aaatcggcgc tcactatccg
     3181 ggctttgaaa ccgatattca cggtgcatac cgtcaggctg atggccgcta taccgttaag
     3241 gtattgaaag aagaaa
//