LOCUS AY007462 2071 bp DNA linear PLN 24-JUL-2016 DEFINITION Ephedra sinica photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products. ACCESSION AY007462 VERSION AY007462.1 KEYWORDS . SOURCE chloroplast Ephedra sinica ORGANISM Ephedra sinica Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Gnetopsida; Gnetidae; Ephedrales; Ephedraceae; Ephedra. REFERENCE 1 (bases 1 to 2071) AUTHORS Rai,H.S., O'Brien,H.E., Reeves,P.A., Olmstead,R.G. and Graham,S.W. TITLE Inference of higher-order relationships in the cycads from a large chloroplast data set JOURNAL Mol. Phylogenet. Evol. 29 (2), 350-359 (2003) PUBMED 13678689 REFERENCE 2 (bases 1 to 2071) AUTHORS Graham,S.W., Reeves,P.A., Burns,A. and Olmstead,R.G. TITLE Direct Submission JOURNAL Submitted (15-FEB-2000) Dept. of Botany, University of Washington, Box 355325, Seattle, WA 98195-5325, USA FEATURES Location/Qualifiers source 1..2071 /organism="Ephedra sinica" /organelle="plastid:chloroplast" /mol_type="genomic DNA" /db_xref="taxon:33152" gene <1..1498 /gene="psbB" CDS <1..1498 /gene="psbB" /codon_start=2 /transl_table=11 /product="photosystem II CP47 protein" /protein_id="AAG12359.1" /translation="VVLNDPGRLISVHIMHTALVAGWAGSMALYELAVFDPSDPVLDP MWRQGMFILPFMTRLGIKESWGGWSITGETEANPGFWSYEGVAGAHIVFSGLCFLSAI WHWVYWDLEIFTDPRTGKPSLDLPKIFGIHLFLSGVVCFGFGAFHVTGLYGPGIWISD PFGLTGKIQPVSPAWGAEGFDPFVPGGIASHHVAAGLLGIIAGLFHLSVRPPQRLYKG LRMGNIETVLSSSIAAVFFASFIVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIDR RVRAGLNKNLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGAMDNGDGIAIGWLGHP IFKDKDGNELFVRRMPTFFETFPVVLVDKEGVVKADVPFRRSESKYSVEQVGVTVEFY GGELDGVSFSDPTIVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFAL LFFFGHIWHGSRTLFRDIFAGIDPELNAQVEFGAFQKLGDPTTKKQVI" gene 1568..1681 /gene="psbT" CDS 1568..1681 /gene="psbT" /note="photosystem II subunit" /codon_start=1 /transl_table=11 /product="PsbT" /protein_id="AAG12360.1" /translation="MEALVYTFLLVSTLGILFFAIFFREPPKVPTKGGKEN" gene complement(1734..1865) /gene="psbN" CDS complement(1734..1865) /gene="psbN" /note="photosystem II subunit" /codon_start=1 /transl_table=11 /product="PsbN" /protein_id="AAG12361.1" /translation="METANLVAIFVSCLLVSLTGYALYTSFGRPSEGLIDPFDNHED" gene 1963..>2071 /gene="psbH" CDS 1963..>2071 /gene="psbH" /note="photosystem II subunit" /codon_start=1 /transl_table=11 /product="PsbH" /protein_id="AAG12362.1" /translation="MATQTVNDTSRTRPRKTGVGSYLKPLNREYGKVAPG" BASE COUNT 598 a 339 c 454 g 679 t ORIGIN 1 tgttgtcttg aatgatcctg gccggttaat ttctgtgcat ataatgcata cagctttagt 61 agcgggttgg gccggttcaa tggctttgta tgaattagca gtttttgacc catctgatcc 121 tgttcttgat cctatgtgga gacaaggtat gtttatttta ccttttatga ctcgtttagg 181 aataaaagaa tcttggggcg gatggagtat tactggagaa actgaagcta atccgggatt 241 ttggagttac gagggtgtcg ctggagctca tattgtgttt tcaggtttat gttttttatc 301 agcgatctgg cattgggtat actgggatct tgaaatattt acagatccgc gcacaggaaa 361 accttcttta gatttaccaa aaatttttgg tattcattta tttctttccg gagtagtttg 421 ctttggattc ggagcttttc atgttacagg tttatatggt cctggaattt ggatttctga 481 tccttttgga cttactggaa aaatacaacc tgtaagccca gcttggggag ctgaaggctt 541 tgatcctttt gttccaggag gaatagcgtc gcatcatgtt gctgcaggtc tattgggaat 601 catcgcgggt ctatttcatc tcagtgttcg tcctcctcaa cgattgtata aaggattacg 661 tatgggaaat attgagaccg ttttatctag cagtattgct gctgtttttt ttgcatcttt 721 tattgttgct ggaaccatgt ggtatgggtc agcaacaacc ccaattgaat tatttggtcc 781 gactcgatat caatgggatc aggggtactt tcaacaagaa atagatcgac gagttcgcgc 841 tggtttgaat aaaaatttaa gtctgtccga agcttggtct aaaattcctg aaaaactagc 901 cttttacgat tacattggaa acaatcctgc taaaggtgga ttattccgcg cgggtgcaat 961 ggacaatgga gatggaatag ctattggttg gttaggacac cccattttca aggataagga 1021 cggaaacgaa ctttttgttc gtcgtatgcc tacttttttt gaaacatttc cagtagttct 1081 agtggacaaa gaaggtgttg tgaaagcgga tgttcctttt aggaggtcag aatccaaata 1141 tagcgtggaa caggtcggcg taactgtcga gttttatggt ggagaacttg atggagtaag 1201 ttttagcgat cctactatag tgaaaaaata tgcgagacgt gctcaattgg gggaaatttt 1261 tgaattagat cgtgctactt taaaatcaga tggggttttt cggagtagtc caagaggttg 1321 gtttactttt ggacacgcta cttttgctct tcttttcttc tttggacaca tttggcatgg 1381 ttctagaaca ctattccgag atatttttgc tggtatcgat ccagaactaa atgcgcaagt 1441 cgaatttgga gcattccaaa aattgggaga tcctaccaca aaaaaacaag tcatataaag 1501 acttacgtct attacttatt acttattact tagtacgaaa gttgtaaaaa aaaaaacgat 1561 tgaatctatg gaagcattgg tttatacatt ccttttggtt tcgactttag gaattctatt 1621 ttttgctatt ttttttagag aaccgcccaa agttccgact aaaggaggaa aagaaaatta 1681 aataaaacaa acaaaaaagg gaagtccaca tggacttccc ttttttgttt gttttagtct 1741 tcatgattgt caaaggggtc tataagacct tcagaaggtc gtccaaagga tgtatatagg 1801 gcatatcctg ttaaacttac gagcaagcac gatacaaaga tagcgactaa gtttgcagtt 1861 tccattttta ggtaactaat aaaaagaatt tatctaatta tactatatta akaaataaaa 1921 acatagtata caaagttaac agatttcaac aaaatatttt atatggctac acaaaccgtg 1981 aatgatactt ccagaaccag accaagaaaa actggggtag ggagttactt aaaaccactt 2041 aatcgtgaat atggtaaagt cgcccccgga t //