LOCUS       AP013900                7457 bp    DNA     linear   HTG 30-OCT-2015
DEFINITION  Uncultured Mediterranean phage uvMED DNA, genomic fragment, group
            G3, isolate: uvMED-CGF-C1C-MedDCM-OCT-S28-C153, *** SEQUENCING IN
            PROGRESS ***.
ACCESSION   AP013900
VERSION     AP013900.1
DBLINK      BioProject:PRJDB1484
KEYWORDS    ENV; HTG; HTGS_PHASE2.
SOURCE      uncultured Mediterranean phage uvMED
  ORGANISM  uncultured Mediterranean phage uvMED
            Viruses; Duplodnaviria; Heunggongvirae; Uroviricota;
            Caudoviricetes; environmental samples.
REFERENCE   1  (bases 1 to 7457)
  AUTHORS   Mizuno,C.M. and Ghai,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2013) to the DDBJ/EMBL/GenBank databases.
            Contact:Rohit Ghai
            Universidad Miguel Hernandez, Evolutionary Genomics Group,
            Laboratorio de Microbiologia; Ctra. de Valencia, s/n, San Juan de
            Alicante, Alicante 3550, Spain
REFERENCE   2
  AUTHORS   Mizuno,C.M., Rodriguez-Valera,F., Kimes,N.E. and Ghai,R.
  TITLE     Expanding the Marine Virosphere Using Metagenomics
  JOURNAL   PLoS Genet. 9, e1003987 (2013)
  REMARK    Publication Status: Online-Only
            DOI:10.1371/journal.pgen.1003987
COMMENT     URL:http://egg.umh.es
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.03
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..7457
                     /clone_lib="MedDCM-OCT"
                     /collection_date="2007-10-15"
                     /country="Spain"
                     /db_xref="taxon:1407671"
                     /environmental_sample
                     /isolate="uvMED-CGF-C1C-MedDCM-OCT-S28-C153"
                     /isolation_source="metagenomic fosmid library constructed
                     from the 0.2-5um-size plankton collected from the deep
                     chlorophyll maximum in the Mediterranean Sea off the
                     coast of Alicante, Spain, 50m below sea surface"
                     /lat_lon="38.4 N 0.13 W"
                     /mol_type="genomic DNA"
                     /organism="uncultured Mediterranean phage uvMED"
     CDS             complement(284..535)
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="BAR22859.1"
                     /transl_table=11
                     /translation="MPQLHGNKAHLHILIDPNRAELVFEKAAEADQRPAAWIREAVYS
                     ELKRVYPTSVYNEAMAKDQVQWRSSIRNRVEGRANQKDI"
     CDS             complement(693..851)
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="BAR22860.1"
                     /transl_table=11
                     /translation="MISIYRTDRGWYSNFGGTVTYHQDFGEAMDAAYRQATRDGALKQ
                     SDPDSNNG"
     CDS             complement(851..2674)
                     /codon_start=1
                     /product="DNA polymerase"
                     /protein_id="BAR22861.1"
                     /transl_table=11
                     /translation="MSYEVLFGMEHLSKLDTAISVCFDTETCQLQPEMGKLRLLQLGC
                     ETRKIIVVIDLFQTDESDWDRLRRFFSNGERHWLAHNAVFDIAWLQEYGIHPNTRFLG
                     CSMLASRLLSNGKTGRKHGLADVVKEYLKINLDKEQQKSNWSGVLTQEQLIYAAKDVE
                     VLCELDRILKDELCQYSLMEAFTLECKALPAMAQMWRTGLPWNKENLAQRKLDYEHDI
                     KELSKEFIRELDSALPEGQKLPRDEDDSFNLRAKDEGSVRAGTKKLKGFNLNSPQQLK
                     SKLSAVLGVKLESVSKNALSEFAGHHPVVQMYLNWKKAEKRRQMITSIQEKMRPDGFV
                     KASYMQLGAETGRMTCFNPNNQQIPKDKQFRGCVEAPKGWLIVDADFGQMELRLAAAV
                     AQDKKMIQAFKDGEDLHTVTAEAIGCTRQIAKSANFGLLYGSGAKGLRNYAAGSNVSM
                     TLEEAQKVRSDWFQEFEGIAKWHKKENDKANNPNPRFKGKKCGIQFIEIPETGMRRDL
                     PGDANRLTVRCNTPVQGAGAAILKQALGKLWPLVREAGEETVRIAAAVHDEILLLVRE
                     DAAEEWAATLKQVMEEAEAKWLGEIPALAEVSFGKTWQETH"
     CDS             complement(2671..2928)
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="BAR22862.1"
                     /transl_table=11
                     /translation="MSDSTALYRAQENLRMMGTCPTWYDHLDEIEAAMAEHDRIYKTR
                     TAAGWEEDEDGWCAPHPENPGEMISEWDWMDFGLSYPEDVK"
     CDS             complement(2962..3225)
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="BAR22863.1"
                     /transl_table=11
                     /translation="MNTDVKFIYCKVQELTDSDVLALVRFTSYDDRSRVLAVEQVTYQ
                     DSMRGFRDFETQVTAALECGVDVAVMTFYDLDYFPIVESMVTQ"
     CDS             complement(3287..3532)
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="BAR22864.1"
                     /transl_table=11
                     /translation="MREVKVAFPEADLERLKKEADLLGVSRSRLIRQRVFSAEERLVS
                     PKDIHELVQKVRRRAGHGVDHRKVEHIVMCVVNEVVN"
     CDS             complement(3700..6129)
                     /codon_start=1
                     /product="bifunctional DNA primase/polymerase"
                     /protein_id="BAR22865.1"
                     /transl_table=11
                     /translation="MNLADFTRTLPKNWATAPIYAQGFRLPGDKGGVACGKSPLGRAH
                     RENLSPHASARYIEQHPDTYKAIGVFTGPRSDGLVILDVDANLASLKRKWGATLKEAP
                     VVVSPKKNAAKYLFRVPKEKWGQVAGISLAASKQGWEVLWGIRRQGLVGGAYYQGGEY
                     KLSGDVNAIPEAPEWLLVEMEESFKKRQEGTSGAQRKDLRYSCRSREEKIAIAENCLS
                     VIPPQGRGSDDFWWRIGAMLHSEMPDEDGLNIWRQWSQKDEEYSDDWKNGDPCADRWE
                     AGFKADGGLGFGSLMHLANHYDPEKARFQGNNLASVVAEIETAPIRYRQETLSYDEAM
                     KQMKEAMDIENPGRRNYEINRIKNEAGYKDQSKLEGVYVDHIGYIEDTGGFTLDELKS
                     KVEKRDFLIPDVLATPAVVVLYAEGGKGKSTAAWTLAKHVVTGSPFVVRGKHAPVAKG
                     GCVILNGDQPLADLDDQLDEVEFPRTKDVHIEPNWNLGNYAQFQNLLKKREPKIVIID
                     SLIGCSGGRAFDENKSDFATPLYWLTRNNGTLFPRTTILIIHHANKQGGFRGTSAIRD
                     AVTETWRLAEPTDKQIEQGIAPRHSRIIHVEKSRSGRSGTALIMRQESDLTFSIADFT
                     AEIDSTDTSPSGITDRVLSRVRAIYPRSISRTELNADPIVGGNVTAIRKALQRWVSRG
                     LITTHGAAVPGQKGGKAPLLYTAVVEQPPHTRVRGEVEDSVPLGEKPCDDAVFAMGQA
                     MGQQPKSEEVSHSPESNGTVSEKEAGCPIAKASDTKGSAPMGQSDQYPRARRSFAEID
                     QLMREAGSKWD"
     CDS             6278..6862
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="BAR22866.1"
                     /transl_table=11
                     /translation="MPFLSQKAVSAVAGGTGGGYLNPSKIQSGSNVRFALLSDQPLEF
                     YECWGEASDGSLKPFRFSEDPKSDDIEAEMGPDYTRRQNRDGTAPEPAKFALAVPVYN
                     FDTEGVQIMQLTQKSIIRELDGISQMEDYANLLEHDFVLGKEGNGLNTEYSLRPVPRK
                     KGSDKAIDSAWTEAKGAGFEIGRLLTGENPFKAD"
BASE COUNT         1695 a         2097 c         1761 g         1904 t
ORIGIN      
        1 cccatggatg cacgacgtaa tacacatgca gcaggatggt gcgtaccatg cagaaaagtg
       61 cgtcttgcgg gacaccgaca gcctgcagta attaaaaagc tactgataca atttctaatg
      121 gtcggcgtat cttactcaga atagtttgag cttggttaaa actgttgtaa ctgcaggcat
      181 ctgaggcggt tatagtccaa aaagtgtcgc cagagttttc ataataggcc gataaaaaca
      241 tggactcgga atcggccact ttgagtgcaa agcgcataaa aagttagatg tctttctggt
      301 tagctcggcc ttcgactctg ttgcgaatgg acgagcgcca ttgcacttga tctttggcca
      361 tagcctcgtt gtaaacgcta gtcggataaa cccgctttag ctcggaatac acagcttctc
      421 ttatccaagc cgctgggcgc tggtctgcct cagccgcttt ttcgaagaca agctccgctc
      481 tgttggggtc aataaggatg tgtagatgcg ctttgttgcc gtgaagctgc ggcatgtgcc
      541 tcaaattgct acaacaatgt taccacgtaa tagagtcatc gactttattt ttccaagcag
      601 tgctttgggc gcggcgagct tgagcgcgtt ggttggtaca gcccgctctt acctcacgcg
      661 ccccttctaa aaacatcgcg gcccgctgca gatcacccgt tgttgctgtc tggatcgctt
      721 tgtttaagcg ctccatcacg agttgcctgc ctgtacgcgg catccatcgc ttccccaaag
      781 tcttggtggt acgttaccgt ccctccaaag tttgagtacc agcctcgatc agtgcggtag
      841 atgctgatca tcagtgagtc tcctgccagg ttttgccgaa agacacctca gccaaagcag
      901 ggatctcgcc cagccatttg gcctctgcct cttccatcac ctgttttaag gtggctgccc
      961 actcttcagc tgcatcctcc ctaacaagca acaaaatttc gtcatgcacc gcagccgcga
     1021 tgcggaccgt ttcttccccc gcctctctaa caagcggcca cagcttgccc aaagcctgct
     1081 tgagaatcgc cgcaccagcg ccctgaacag gcgtattaca gcgaacagtt aggcggttag
     1141 cgtcaccagg cagatctctc ctcataccag tttcaggtat ttctataaac tgaataccgc
     1201 acttcttgcc cttaaatcta gggttagggt tattagcttt gtcgttctct ttcttgtgcc
     1261 atttagctat accttcaaac tcttgaaacc agtcggacct aactttctgc gcttcttcca
     1321 acgtcatgct cacgttgctg cccgcagcat aattacgaag acccttagct ccggacccat
     1381 acagaagacc aaaattggca gacttggcaa tctggcgcgt acacccaata gcttcagctg
     1441 tcactgtgtg caagtcttcc ccgtctttga atgcctggat cattttcttg tcctgcgcca
     1501 cagccgccgc taaacgcagc tccatctggc caaagtcagc gtcaacaatt agccagccct
     1561 tcggagcttc tacgcaacca cgaaactgtt tgtccttagg tatctgctga ttgttcgggt
     1621 tgaagcacgt catacgtcct gtttcagcgc ctaactgcat gtaactggct tttacaaacc
     1681 catccgggcg catcttctcc tggatcgaag taatcatttg ccgtcttttt tcagctttct
     1741 tccagttcaa atacatctga acaacagggt gatgtccagc aaactcgcta agcgcatttt
     1801 tagacacact ctcaagcttt acccccagaa cagcagataa cttacttttc agttgctgag
     1861 gactatttaa attaaagccc ttaagctttt tagttcctgc tctgacgcta ccctcgtcct
     1921 tggcacgtaa attaaaagag tcgtcctcat ctctaggcag cttttggcct tcaggtaaag
     1981 ccgaatcaag ctccctgata aactctttcg acagctcctt tatatcgtgt tcgtaatcta
     2041 actttctctg tgcgagattt tctttgttcc atggcaggcc cgtcctccac atttgagcca
     2101 tagcaggcaa cgccttacac tccaatgtga aggcttccat taaactgtat tgacaaagct
     2161 cgtccttcaa gattcggtct aactcgcaca aaacctccac atcttttgca gcgtaaatta
     2221 actgctcttg agttaaaact cccgaccagt ttgacttttg ctgctcctta tctaagttaa
     2281 tttttaaata ctcttttaca acatctgcga gaccgtgctt cctgccagtt tttccgttag
     2341 ataacaagcg gctggcaagc atggagcagc cgagaaaccg cgtatttggg tggattccat
     2401 attcttgcaa ccacgcaata tcaaacacag cgttatgggc aagccagtgg cgctctccat
     2461 tgctgaagaa gcgccgcaaa cgatcccagt cgctttcatc tgtttgaaaa aggtcgatga
     2521 caacaataat cttccgggtt tcgcagccaa gctgaagcag ccgcagcttt cccatctctg
     2581 gctgaagctg gcacgtctcc gtgtcaaagc agacgcttat agccgtgtct agcttggaga
     2641 ggtgctccat gccaaaaaga acttcgtaac tcacttcacg tcctccgggt aggagagacc
     2701 aaagtccatc caatcccact cagagatcat ctcgccaggg ttttcaggat gtggagcgca
     2761 ccagccgtct tcatcttctt cccaaccggc ggctgtacgg gttttgtaga tgcgatcgtg
     2821 ttccgccatt gctgcttcga tctcgtccag gtggtcgtac cacgtagggc acgtccccat
     2881 catgcggaga ttttcttgtg ctctatagag agctgtggag tcagacatgg gtagtgtcgt
     2941 gaactccgtt agagtagcac actactgagt gaccatgctc tccacaatag gaaaataatc
     3001 taagtcgtag aaagtcatca cagccacgtc aacgccgcat tcgagagctg cggtaacctg
     3061 cgtttcaaaa tctctaaacc ccctcatcga gtcctggtaa gtgacctgct caacagccag
     3121 cacgcgcgag cggtcgtcgt agctagtaaa ccgcactaaa gctaagacgt cagagtcagt
     3181 cagctcctgc accttgcagt agataaattt gacatctgtg ttcatgcagg caaaccccct
     3241 atctggagta tgggtactca taccaaaaaa caagccacgg agccgtttaa ttaaccactt
     3301 catttacaac acacatgacg atgtgctcga ccttgcggtg gtctacgccg tgacctgctc
     3361 tacgacgaac tttttgaaca agctcatgga tgtctttcgg actgactagc cgctcttcag
     3421 cagaaaaaac ccgttgtctg atcaacctgg aacgggaaac gccaagtaag tctgcttctt
     3481 ttttcaagcg ttccaggtcg gcttccggga aagcaacttt tacttctcgc atggtcaaaa
     3541 gtttttactc caatacagta gcacattaac gctgcttggc ttttttgcga agctcacgga
     3601 tgtagtcccg ttcagcaaaa agctctttcc agtcgtgggg aggttctggc atccattcct
     3661 ggagcttggc ctcccatttc tgaaaccgct gtttatcggt cagtcccact tagaccccgc
     3721 ttcacgcatc aactgatcaa tctccgcgaa agatcgcctc gcgcggggat attgatctga
     3781 ctgtcccatt ggggcagatc ccttggtatc agacgcttta gcaatgggac acccagcctc
     3841 tttttcagaa actgtcccat tgctctcggg tgaatgggac acctcctccg attttggctg
     3901 ttgtcccatt gcttgtccca ttgcaaaaac cgcgtcatca caaggttttt cccccaatgg
     3961 gacactatct tcaacctctc cgcgcacgcg cgtgtgtggg ggttgttcaa caacagctgt
     4021 gtaaagcagt ggagctttac cgcctttctg ccctggaaca gcagccccgt gggtcgttat
     4081 caagccccga ctaacccagc gttgaagcgc tttacggatt gctgtgacat tgcccccaac
     4141 aatcgggtcc gcgttcagct ctgttcggct gatggagcgt gggtagatcg ctctaacgcg
     4201 cgacagaacg cgatcagtaa ttccgctagg cgacgtgtcg gtgctgtcga tctctgcggt
     4261 gaaatccgcg attgagaaag tcaggtcaga ctcctggcgc ataatcagcg ccgtgccgct
     4321 cctaccacta cggctcttct caacatgaat gatccggctg tgccgtggag cgatgccctg
     4381 ctcgatctgc ttgtccgtgg gctcagcaag cctccaggtc tctgtaacgg cgtcacggat
     4441 cgctgaggtg cctctgaagc cgccttgctt gttggcgtgg tgaatgatca ggatggtggt
     4501 ccgtgggaac agagtgccgt tgtttctggt cagccaatac agcggcgtag cgaagtcgga
     4561 tttgttctcg tcaaacgccc gaccaccaga gcagccaatc agggagtcga tgatcacgat
     4621 tttcggttcc cgctttttca acaaattttg aaactgggcg taatttccca aattccagtt
     4681 gggctcaata tgcacatctt ttgtgcgcgg aaactcaacc tcatccagct gatcatccaa
     4741 atcagccaac ggctggtcgc cgttaagaat tacgcaacca cctttcgcca ctggagcatg
     4801 cttgccccga acaacaaaag gtgatccggt aacaacgtgc ttagccagcg tccaagcagc
     4861 agtggatttg cccttaccac cttccgcata gagtacgact actgcgggtg ttgccagaac
     4921 gtcaggaatt aagaagtcgc gtttttcaac cttcgattta agttcatcca aggtgaaccc
     4981 acctgtgtct tctatgtatc caatgtgatc aacgtaaaca ccttcaagtt ttgactggtc
     5041 cttgtaaccc gcctcgtttt taatacgatt tatctcataa ttacgtctgc ctggattttc
     5101 aatatccatg gcttccttca tctgcttcat cgcctcgtca tacgagaggg tctcctgcct
     5161 gtaacggatc ggcgctgttt cgatctctgc caccaccgat gcaagattgt tcccttgaaa
     5221 tcgagccttc tctgggtcgt agtgattagc caggtgcatc aagctgccaa accccagccc
     5281 tccgtcagct ttgaagcccg cctcccagcg atcagcgcag ggatcgccgt tcttccagtc
     5341 gtcgctgtac tcctcgtctt tctgcgacca ctgccgccag atgtttaagc cgtcttcatc
     5401 cggcatctcg gagtgcagca tcgcgccgat ccgccaccag aagtcatcag acccacgtcc
     5461 ctgcggtgga atgacagaca agcagttttc agcgatggca attttctcct ccctggaacg
     5521 gcagctgtaa cgcaggtctt tcctttgcgc tccgcttgtt ccctcctgcc gcttcttaaa
     5581 cgactcctcc atctccacca gaagccactc aggagcctct ggaatggcgt tcacatcgcc
     5641 tgaaagcttg tactccccgc cttggtagta agcaccccct acaaggccct gacggcgtat
     5701 gccccacaga acctcccaac cctgtttgct ggcagccaag ctgatcccag caacctggcc
     5761 ccatttctcc ttaggcaccc gaaacaggta tttagcggca ttctttttcg gagaaaccac
     5821 aacaggagcc tccttgaggg tggctcccca cttccttttc aacgacgcaa ggttggcgtc
     5881 aacatcaagg atcaccagac cgtcgctgcg tggacctgta aacacgccga tcgccttgta
     5941 cgtgtctggg tgctgttcga tgtagcgagc ggaagcgtga gggctgaggt tctctctgtg
     6001 cgctcttccc agcggtgact taccgcaagc cacaccacct ttgtcgccgg gcagcctgaa
     6061 gccctgggca tagatcggtg cagtggccca gtttttggga agagtccttg tgaaatcagc
     6121 gagattcatt tgctacagta gtgccgttga actttttaca gacacccctg gaggcttctg
     6181 cggccccagg ggttttttca ttctacagca gttgacagcc cccgccattg tgctacgttt
     6241 atgaggcacc gggcaacgtg cccaccgcaa ttttcaaatg ccttttcttt ctcaaaaagc
     6301 cgtctcagca gtagccggag gcactggtgg tggttatcta aacccctcca agatccaatc
     6361 cggcagcaat gtgcgctttg cattgttgag cgaccagcct cttgagtttt atgagtgctg
     6421 gggcgaagcc agcgacggtt cgctcaagcc ttttcgtttt tctgaggatc caaaatccga
     6481 cgacatcgag gccgaaatgg gtcctgatta cacacggcgt cagaaccgtg atggcactgc
     6541 acccgagcca gcaaagttcg ctcttgctgt tcctgtatac aacttcgata cagagggcgt
     6601 gcagattatg cagctcaccc aaaaaagcat catccgcgag ttggacggca tttctcaaat
     6661 ggaggactac gccaatctgc tggagcatga ttttgttctc ggcaaagagg gcaacggcct
     6721 taacaccgag tacagccttc gccctgttcc ccgtaagaag ggatcggata aggcgattga
     6781 cagtgcctgg actgaagcca agggcgctgg atttgagatt ggtcgcttgt tgactggcga
     6841 aaacccattc aaagccgact gatgttgtgc ggcaggacta gaaaagtcat taacttcgaa
     6901 ttcttgcctg cccgcaattt gcgctgcaac tgctcgggcc gtgcggttgt gtacgagggt
     6961 gcaaattgca aaagctcagg gttctcaccg cagagtgcta gtggttccta ggtactattc
     7021 atggctggta ctaaggcagg agcgtccgta agtccgcatt caatacaagg gggctttcta
     7081 gccccttttg tagtaagtaa gcttgtaaaa actcagtgat agatgccagt cgatacccag
     7141 gacgcgttag ccggtttacg gcgctggaac ttggtacgtg atgactcggg ctcccaccgc
     7201 gtttataggg acgaaaaagg caacacatat gcgtcagtga cgcacattct caaggaaacc
     7261 tcaccgcaat ggcaaaaaga tgccctggac cgttggcttg aaagacctac tgctcccgct
     7321 gagcgtgaca ttgcctgcca gcgcgggact cttgctcacg atcacgcgga atatgtcctc
     7381 aaaacggcag ccaagctggc gcgtaacagc gctaacaagc gaggaagctg gaggactgga
     7441 gatgacggcc tggaacg
//