LOCUS AL834247 5754 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp451E012 (from clone DKFZp451E012);
complete cds.
ACCESSION AL834247
VERSION AL834247.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5754)
AUTHORS Wambutt R., Heubner D., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (16-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by AGOWA (Berlin/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp451E012) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..5754
/db_xref="H-InvDB:HIT000028977"
/organism="Homo sapiens"
/map="10q21.3"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="451 (synonym: hlcc1). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp451E012"
/tissue_type="human skeletal muscle"
/db_xref="taxon:9606"
CDS <1..4177
/codon_start=2
/gene="DKFZp451E012"
/product="hypothetical protein"
/note="myopalladin"
/db_xref="GOA:Q86TC9"
/db_xref="H-InvDB:HIT000028977.17"
/db_xref="HGNC:HGNC:23246"
/db_xref="InterPro:IPR003598"
/db_xref="InterPro:IPR003599"
/db_xref="InterPro:IPR007110"
/db_xref="InterPro:IPR013098"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR036179"
/db_xref="UniProtKB/Swiss-Prot:Q86TC9"
/protein_id="CAD38923.2"
/translation="GGDRLSSFLQPSSLKLRLTPHSLWTATLYFQGREEFPSSPVLSS
KSSPWIIIIAVECLDWTSSSGSTKKESMQDDSIEASTSISQLLRESYLAETRHRGNNE
RSRAEPSSNPCHFGSPSGAAEGGGGQDDLPDLSAFLSQEELDESVNLARLAINYDPLE
KADETQARKRLSPDQMKHSPNLSFEPNFCQDNPRSPTSSKESPQEAKRPQYCSETQSK
KVFLNKAADFIEELSSLFKSHSSKRIRPRACKNHKSKLESQNKVMQENSSSFSDLSER
RERSSVPIPIPADTRDNEVNHALEQQEAKRREAEQAASEAAGGDTTPGSSPSSLYYEE
PLGQPPRFTQKLRSREVPEGTRVQLDCIVVGIPPPQVRWYCEGKELENSPDIHIVQAG
NLHSLTIAEAFEEDTGRYSCFASNIYGTDSTSAEIYIEGVSSSDSEGDPNKEEMNRIQ
KPNEVSSPPTTSAVIPPAVPQAQHLVAQPRVATIQQCQSPTNYLQGLDGKPIIAAPVF
TKMLQNLSASEGQLVVFECRVKGAPSPKVEWYREGTLIEDSPDFRILQKKPRSMAEPE
EICTLVIAEVFAEDSGCFTCTASNKYGTVSSIAQLHVRGNEDLSNNGSLHSANSTTNL
AAIEPQPSPPHSEPPSVEQPPKPKLEGVLVNHNEPRSSSRIGLRVHFNLPEDDKGSEA
SSEAGVVTTRQTRPDSFQERFNGQATKTPEPSSPVKEPPPVLAKPKLDSTQLQQLHNQ
VLLEQHQLQNPPPSSPKEFPFSMTVLNSNAPPAVTTSSKQVKAPSSQTFSLARPKYFF
PSTNTTAATVAPSSSPVFTLSSTPQTIQRTVSKESLLVSHPSVQTKSPGGLSIQNEPL
PPGPTEPTPPPFTFSIPSGNQFQPRCVSPIPVSPTSRIQNPVAFLSSVLPSLPAIPPT
NAMGLPRSAPSMPSQGLAKKNTKSPQPVNDDNIRETKNAVIRDLGKKITFSDVRPNQQ
EYKISSFEQRLMNEIEFRLERTPVDESDDEIQHDEIPTGKCIAPIFDKRLKHFRVTEG
SPVTFTCKIVGIPVPKVYWFKDGKQISKRNERCKMRREGDGTCSLHIESTTSDDDGNY
TIMAANPQGRISCSGHLMVQSLPIRSRLTSAGQSHRGRSRVQERDKEPLQERFFRPHF
LQAPGDMVAHEGRLCRLDCKVSGLPPPELTWLLNGQPVLPDAPHKMLVRETGVHSLLI
DPLTQRDAGTYKCIATNKTGQNSFSLELSVVAKEVKKAPVILEKLQNCGVPEGHPVRL
ECRVIGMPPPVFYWKKDNETIPCTRERISMHQDTTGYACLLIQPAKKSDAGWYTLSAK
NEAGIVSCTARLDIYAQWHHQIPPPMSVRPSGSRYGSLTSKGLDIFSAFSSMESTMVY
SCSSRSVVESDEL"
regulatory 5716..5721
/regulatory_class="polyA_signal_sequence"
polyA_site 5733
BASE COUNT 1636 a 1449 c 1304 g 1365 t
ORIGIN
1 cggtggtgac aggttgtcca gcttcttaca gccatcttca ctgaaactaa ggttaactcc
61 tcactctcta tggacggcta ctctctattt ccaagggcgt gaagaatttc cctcttctcc
121 tgtgctttca tctaaaagtt ctccctggat aattatcatt gcagtggagt gcctggattg
181 gacatcctca tctgggtcaa ctaaaaaaga aagcatgcaa gacgacagca tagaagcttc
241 tacttccata tctcagcttc taagagagag ctatttagct gaaaccagac atcggggaaa
301 caatgagagg agtcgagcgg agccctcctc caacccttgc catttcggca gtccttctgg
361 ggccgctgaa ggaggcggag gccaagatga ccttccagat ctttcagcct ttctgagcca
421 agaagaatta gacgaaagtg tcaatttggc aagactggcc atcaattacg accctttgga
481 gaaggcagat gaaactcaag ctagaaaacg actttctcct gatcagatga aacactcacc
541 taatttaagt tttgagccta acttctgcca ggataaccct cgaagtccca ccagctctaa
601 agaaagcccc caggaggcaa aaaggccaca gtattgttct gaaacccagt ccaaaaaagt
661 atttttaaat aaggctgccg acttcattga agagctatcc tcccttttca aatcccacag
721 ctccaaaagg attagacctc gtgcctgcaa aaaccacaag agtaaactgg aatctcaaaa
781 caaagttatg caggaaaaca gctccagttt ctcagatctg tcagaaagac gagaaagatc
841 ttctgttccc atccctatcc ctgcggatac cagggataat gaagtgaatc acgccctgga
901 acagcaggaa gccaagaggc gtgaagcgga gcaggctgcc agtgaggcgg ctggtggaga
961 cactacacca gggtcttccc cttcatctct gtactatgaa gaacctctgg ggcaacctcc
1021 ccggttcact caaaagttac ggagcagaga agttccagaa ggaactcgag tacagttgga
1081 ttgcatagtg gtaggaattc caccacctca agtaaggtgg tactgtgaag gcaaggagct
1141 tgaaaattcc ccagatattc acatcgtcca ggcaggaaat ctgcactcac tgaccattgc
1201 ggaagccttt gaagaggaca caggacgcta ttcctgcttt gcttctaaca tctatgggac
1261 agattcgact tctgctgaga tttatataga aggggtttct tcttctgact cagaaggcga
1321 ccctaacaag gaagagatga atcgaatcca gaagccaaat gaggtgtcat ctcctcccac
1381 tacctctgca gtcattcctc cagcagtacc ccaagcccag catttggtgg cccaacctcg
1441 tgtggcaacc atccagcagt gtcaaagccc caccaattac ttgcagggat tggatggaaa
1501 acctatcatt gcagctcctg tgtttacaaa gatgctacaa aatttgtcag cttctgaggg
1561 tcagctggtt gtctttgaat gcagagtaaa aggagctcca tctcctaagg ttgagtggta
1621 tagagaaggg actttaatag aagattctcc agattttagg attttacaga aaaaacctcg
1681 atccatggca gagccagagg agatttgcac cttggtcatt gctgaggtgt ttgcagaaga
1741 ttctgggtgc ttcacatgta ctgcaagcaa caaatacggc acagtgtcaa gcattgcaca
1801 gctgcacgtg agaggaaatg aggacctcag caacaacggg tctcttcact cagccaactc
1861 taccaccaac ctggcagcta ttgagccaca gccctcccca ccccactcag agcctccatc
1921 tgtggaacaa ccccccaaac ccaaactcga gggggttctg gtgaaccaca atgagccccg
1981 gtccagctcc aggattgggc ttcgtgtgca cttcaacctg cctgaagatg acaaaggaag
2041 tgaagcatcc tccgaggctg gtgtggtgac caccagacag accaggcccg attctttcca
2101 ggagaggttc aacggacagg caacaaaaac cccagagcct tcttcccccg tgaaagagcc
2161 ccctccagtt ctggccaaac ccaaacttga ttccactcag ttacaacagc ttcataacca
2221 agtcttactg gaacaacacc aattgcaaaa cccacctcct tcatctccta aggagtttcc
2281 tttcagcatg actgttttga actccaatgc tcccccagcg gtgacaacat ccagtaagca
2341 ggtgaaggct ccttcatcac agacgttcag cttggcccgg ccgaagtatt tcttcccctc
2401 cacgaacacc accgcagcaa ctgtggcccc ttccagctct ccggtgttca ctttgagcag
2461 cactcctcaa actattcaga ggacagtgag caaagaaagc ctcttagtgt ctcacccctc
2521 tgtgcaaacc aaatctccag gagggctttc catccaaaat gagccactcc caccaggccc
2581 aacagaacca acaccaccac cattcacatt ttccatcccc agcggaaacc agtttcagcc
2641 ccgctgtgtg tccccaattc ctgtctctcc taccagccgg attcagaacc cagtggcttt
2701 cctcagctct gttctgcctt ctctccctgc catcccaccc acaaatgcca tggggctgcc
2761 tagaagtgca ccatccatgc catcccaggg attagcgaag aaaaatacaa agtctcctca
2821 accagtgaat gatgataaca ttcgtgaaac taagaacgca gtgattcgag acttggggaa
2881 aaaaataact ttcagtgatg tcagaccaaa ccagcaggag tacaaaattt caagctttga
2941 gcagaggctg atgaatgaaa tagagtttcg cttggaacgt actcctgttg atgaatcaga
3001 tgatgaaatt caacatgatg agatccccac gggcaagtgt attgctccca tctttgacaa
3061 gagactcaag cacttccggg tcacagaagg ctctccagtc acattcacct gcaaaattgt
3121 tgggatacct gttccaaagg tttactggtt caaagatggg aagcagattt ctaagagaaa
3181 tgagcgctgc aaaatgaggc gagaaggaga tgggacatgc tctctgcaca ttgaatccac
3241 taccagtgat gacgatggca actacaccat catggcagcc aacccccagg ggagaatcag
3301 ctgttctggc cacttgatgg tacaaagttt gcccattcgc agtcggctaa cctctgctgg
3361 tcagtctcac aggggaagat cccgagtgca agaaagagac aaagagcccc tacaggaacg
3421 ctttttccga ccacatttcc tgcaggctcc tggggatatg gtagctcatg aggggcgcct
3481 ctgtcggctg gactgtaagg tgagtggttt accgcccccg gagctgacat ggctactcaa
3541 tggccaacct gtgctaccag atgcccccca caagatgctg gtcagggaga ccggagtcca
3601 ctctctgctc attgacccac tcactcagcg cgacgcaggg acctataagt gcatcgctac
3661 caacaaaacc gggcagaatt cttttagtct ggagctctct gtagtagcca aagaggtgaa
3721 gaaagcacct gtgatcctgg agaaactaca gaactgcggt gttcccgaag gccaccccgt
3781 gagactggag tgccgcgtga taggcatgcc cccacctgtg ttctactgga agaaagacaa
3841 tgagaccatc ccttgcacca gagagaggat cagtatgcac caggacacaa cagggtatgc
3901 ctgccttctc attcagccag ccaagaaatc agacgctgga tggtacacgt tgtcagccaa
3961 gaatgaagcc ggcatcgtgt cgtgcactgc caggctggat atatacgctc agtggcacca
4021 tcagatccca ccgcccatgt ctgtccggcc cagtggcagt cgctacggat ctctcaccag
4081 taaaggactt gacatatttt ctgccttttc ctccatggaa agcacgatgg tgtattcatg
4141 ctcttctcgg agtgtagtgg agagtgatga actttaagaa tgtctaggta cctgctgtgt
4201 aagagagcgg actgtggagg gggaatgaga acaagccaga cttggtggtt tccaagcaac
4261 cgaagttgag taagttccca cactgctgga cctgtggcaa agagtgcttt gaataagtca
4321 gctagggatt cttgcagtct cagctgaggg agaaaggtag ggctgtgcct tctaaagatt
4381 ccaacagaga tgtgagaaga taatacagat gaaccaaaga tgtcacacag ttgccatcca
4441 ctgctttggg aaaaaactag catgctcccc tgctccctgt tgtgttaggg atgtttaggt
4501 catactagga gcaattagga gccatatgcc tgggctgaga agagctaggc agtagtgacc
4561 ttaggatatg actaactcac caaacaatgc caaggagaaa ggcggacagg tcaccatcac
4621 ctttcatcga ttacatgtat agcagtagtt ttggtgaatt caccaaatca gcttccactt
4681 agcattagga ggtcatgcca tacaactcac gtatgcgggc aaacactttt gatttgcata
4741 tcctgggtgt actgagccac ataataaggt gtcaaaatgt gcttgagatt ccaaaaactt
4801 gctgaaacac ttgatattgc acagtgcact tattttgtgg ccaaagcatg gccttaccac
4861 cttgtctgca ctattttctt ttgggtggtg actgtttttt tctgactttg catatcccta
4921 gacactagaa ctaaaggatt ggtaataaac caatcagaaa gaaatcctct gtggggtcac
4981 tttaaaaact actagcttca actaccactt acaaaatgtg caagagtcat catttgccca
5041 taaaatacac ctcatgggct cctacccctt tccccaaaag tctgaaagtg taggaggaag
5101 gaaagataca aacaaggaga ggaaatgatg ggagagtgtt gtttttgtca cttgccccag
5161 cagagcaggg gttttggaag gagaggtctt taatagcttt gaaatgcttt gagatcattg
5221 gtcaaattgc attttctatg tagagaatat tctgctaggt ggaaaagttg ggagaaaggg
5281 gaatatgcat ctttattcta atcaccaatt caaaccctgc ctcttaagga atttttagac
5341 ttaagttcac tgtgatatcc ctagtaccta gaagagtacc tagcacaaag tagacattca
5401 ataaatattt gctggttgaa tgaatcttct gttattatgt ctattataag ataacctaat
5461 cttatattct gcaggaatat gccacccaca caccagtcca aacactgccc tgggaatgct
5521 catcacagca cagtttgctc taggctgtac agggaaatga attgcaggtg tctgttttca
5581 attccctgtg ctggaatccc tggtgctgtc tgtgccaagc acactcagct ggcattgtat
5641 ttgtgtgaac agacagtaac tgcttagaaa ggtttgaaac tgtcttcact tcaaggcaag
5701 gatttccagc ataaaaataa attcattcac tggagaaaaa aaaaaaaaaa aaaa
//