LOCUS AK363760 2286 bp mRNA linear PLN 20-MAY-2011
DEFINITION Hordeum vulgare subsp. vulgare mRNA for predicted protein,
complete cds, clone: NIASHv2018L02.
ACCESSION AK363760
VERSION AK363760.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Hordeum vulgare subsp. vulgare (domesticated barley)
ORGANISM Hordeum vulgare subsp. vulgare
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
REFERENCE 1 (bases 1 to 2286)
AUTHORS Matsumoto,T., Kanamori,H. and Tanaka,T.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2010) to the DDBJ/EMBL/GenBank databases.
Contact:Takashi Matsumoto
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; Kannondai 2-1-2, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Matsumoto,T., Tanaka,T., Sakai,H., Amano,N., Kanamori,H.,
Kurita,K., Kikuta,A., Kamiya,K., Yamamoto,M., Ikawa,H., Fujii,N.,
Hori,K., Itoh,T. and Sato,K.
TITLE Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs
Derived from 12 Clone Libraries
JOURNAL Plant Physiol. 156, 20-28 (2011)
COMMENT This clone was obtained at our laboratory
Please visit our web site
URL: http://barleyflc.dna.affrc.go.jp/hvdb/index.html
FEATURES Location/Qualifiers
source 1..2286
/clone="NIASHv2018L02"
/clone_lib="Normalized and subtracted barley full-length
cDNA library from seedling shoot and root on Aluminium
stress"
/cultivar="Haruna Nijo"
/db_xref="taxon:112509"
/dev_stage="seedling"
/mol_type="mRNA"
/organism="Hordeum vulgare subsp. vulgare"
/sub_species="vulugare"
/tissue_type="shoot and root"
CDS 94..1965
/codon_start=1
/product="predicted protein"
/protein_id="BAJ94963.1"
/translation="MTVEGRVGGGDGGGKDKFPVGMRVLAVDDDPTCLKVLENLLRRC
DYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSA
NGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTKNRGSDNDDASQKGPNAE
GENGGANRNKRQSRRDRDENGDDGDDSDENSNDNGDSSSQKKPRVVWSVELHRKFVAA
VNQLGIDKAVPKKILDLMNVENITRENVASHLQKYRLYLKRMSMDASRQANLVAALGG
RNPAYSNMNSMDVFRHYNNAYGRYRPVPTSTHSQSNNLVARMNSPSAYGMHGLLSPQS
QPLHLGHAQNNNLGTSLNDLGVNNGNLIRTAHMSTMVTGTSGNTFANISNGAQLAPTN
RAVQPLESSNRQHLGRINSSSTDSFSSFTSDSPHFPDLGRSSNTWQTAVPSNIQQLGQ
NGSMSQASFHGNGPRMEPVSSYAPPSNQITSLGNEMQNQVAPLASNTLPMVFNQGAAP
FTFGNSTNSREAHNSNLAFSNSGINTSLPNLRIDNSIMPRQTLDGGNTGGVPSLQDGK
IDQQAVGNQLNYSNNDLVGTSGLQRELSGGLDDIVVDMFRPDNDTGGIFIDTDWGLV"
BASE COUNT 595 a 533 c 610 g 548 t
ORIGIN
1 ggtaggatcc agggacgccg ttcgccgggg cattaggtga tccggctggg ctgtgttggg
61 ctcgcggcgg aggaggggaa ggaccgaagg aagatgaccg tggaggggag ggtcggcggg
121 ggggacggcg gcggcaagga caagttcccg gtgggcatgc gcgtgctcgc cgtcgacgac
181 gaccccacct gcctcaaggt cctcgagaac ctcctgcgcc gctgcgacta ccatgttacc
241 accactgggc aggcagccac cgccctcagg atgctcaggg agaacaagga ccagtttgac
301 ctcgtgatca gcgatgtcca catgccggac atggatggtt tcaagctcct cgagcttgtc
361 ggtctggaga tggacctccc agtcattatg ttgtctgcaa atggggagac acagacagtc
421 atgaagggca taactcatgg agcatgtgac tacctgctaa agccggtgcg tcttgagcag
481 ctgaagacaa tatggcaaca tgtgattagg cggaatacca agaaccgtgg tagtgacaac
541 gatgatgcca gtcagaaggg gccgaatgct gaaggtgaga atggtggcgc taaccgcaac
601 aagaggcagt cacggaggga tagagatgag aatggagatg atggtgacga ttctgatgag
661 aacagtaatg acaacggcga ctcgtcatcc cagaagaagc caagggttgt gtggtctgtg
721 gagctgcacc ggaagtttgt agctgctgtc aaccagcttg gcattgacaa ggctgttcca
781 aagaagatat tggacctcat gaacgtagag aacatcacca gggagaatgt tgctagtcat
841 ctgcagaagt accggctgta tctgaaaagg atgagtatgg atgcaagcag acaggctaac
901 ctagttgctg cacttggagg aaggaatcct gcttacagca atatgaattc aatggatgtc
961 ttcaggcact acaacaacgc gtacggtaga taccgaccag ttccaaccag cacccattcc
1021 cagtcaaata accttgttgc aaggatgaac tccccttctg catatggaat gcatgggttg
1081 ctgtctccac agtcgcagcc acttcacctt ggccatgccc agaataataa tctgggcact
1141 tccctgaatg atttaggggt caataatggt aacctgatca gaactgcaca catgtcaacg
1201 atggtgactg gtacctctgg taacactttt gcaaacatat caaatggtgc acaattggct
1261 cctacaaata gggcagttca gcctcttgaa tcaagcaaca ggcaacacct tggtcggata
1321 aattcgtctt cgacagactc atttagctca ttcactagcg attctcccca ctttccagat
1381 cttggaagaa gtagtaacac ctggcaaact gcagttccat ccaacattca gcaacttggt
1441 cagaacggca gcatgtccca agcaagtttt catgggaatg gtccaaggat ggaacctgtc
1501 tcaagctatg caccaccatc aaatcagatt acatctctag gaaatgagat gcagaatcaa
1561 gttgcgccac tagctagcaa tacccttcca atggtattca atcagggtgc agcgccattc
1621 acctttggaa acagcacaaa ctcgagagag gcacacaata gcaaccttgc gttcagcaat
1681 tcaggcatca acacttcttt gccaaacctt cgcattgaca attcgattat gccaaggcag
1741 actctggatg gcgggaatac aggcggtgtt ccctctctgc aggatggcaa gattgatcag
1801 caagctgttg gtaatcagct caattacagc aacaatgatc tcgtggggac gagtgggctg
1861 caaagggagc tcagtggtgg tttggatgac attgttgttg acatgttcag gccggataac
1921 gatactggtg gcattttcat cgacacggac tgggggctgg tctagccagt ctgctttcac
1981 caagtcccat gcgcgagatt ttccgcattt gtgtggtgtc tgctgctgat ttgtccatca
2041 tatgcaattg cctgctcaaa gttgtccata gtagcaagcc ttcatcacaa atgccttttg
2101 catttggttt tctcagttta gcgtttggtt ccgtgttagt cgtccagtat tcagagttat
2161 attgggtaac aactatatgc tgtttgggtc cgtgactcgc ataattatat taattcaggt
2221 ataccctgtt tatcgtaaga tatagtatgc ttggtatgca agtgaattct tcgtgttaat
2281 tgttgg
//