LOCUS AK313096 1386 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93580, highly similar to Homo sapiens TRAF
family member-associated NFKB activator (TANK), transcript variant
1, mRNA.
ACCESSION AK313096
VERSION AK313096.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1386)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1386
/clone="BRTHA2006363"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000431962"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 109..1386
/note="highly similar to Homo sapiens TRAF family
member-associated NFKB activator (TANK), transcript
variant 1, mRNA"
/protein_id="BAG35920.1"
/translation="MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQ
QEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGI
AREKLPKVRRQEVSSPRKETSARSLGSPLLHERGNIEKAFWDLKEEFHKICMLAKAQK
DHLSKLNIPDTATETQCSVPIQCTDKTDKQEALFKPQAKDDINRGAPSITSVTPRGLC
RDEEDTSFESLSKFNVKFPPMDNDSTFLHSTPERPGILSPATSEAVCQEKFNMEFRDN
PGNFVKTEETLFEIQGIDPIASAIQNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDH
NALYVNSFPLLDPSDAPFPSLDSPGKAIRGPQQPIWKPFPNQDSDSVVLSGTDSELHI
PRVCEFCQAVFPPSITSRGDFLRHLNSHFNGET"
BASE COUNT 469 a 307 c 285 g 325 t
ORIGIN
1 actcggccag gcgccggcga cctgagggga gagggaacgc agctgaaagc gtgaactgta
61 cctgtcattt actccatcct ttatagtgat gctacaggac gaagaggaat ggataaaaac
121 attggcgagc aactcaataa agcgtatgaa gccttccggc aggcatgcat ggatagagat
181 tctgcagtaa aagaattaca gcaaaagact gagaactatg agcagagaat acgtgaacaa
241 caggaacagc tgtcacttca acagactatt attgacaagc taaaatctca gttacttctt
301 gtgaattcca ctcaagataa caattatggc tgtgttcctc tgcttgaaga cagtgaaaca
361 agaaagaata atttgactct tgatcagcca caagataaag tgatttcagg aatagcaaga
421 gaaaaactac caaaggtaag aagacaagag gtttcttctc ctagaaaaga aacttcagca
481 aggagtcttg gcagtccttt gctccatgaa aggggtaata tagagaaggc tttctgggat
541 ctgaaagaag aatttcataa aatatgcatg ctagcaaaag cacagaaaga ccacttaagc
601 aaacttaata taccagacac tgcaactgaa acacagtgct ctgtgcctat acagtgtacg
661 gataaaacag ataaacaaga agcgctgttt aagcctcagg ctaaagatga tataaataga
721 ggtgcaccat ccatcacatc tgtcacacca agaggactgt gcagagatga ggaagacacc
781 tcttttgaat cactttctaa attcaatgtc aagtttccac ctatggacaa tgactcaact
841 ttcttacata gcactccaga gagacccggc atccttagtc ctgccacgtc tgaggcagtg
901 tgccaagaga aatttaatat ggagttcaga gacaacccag ggaactttgt taaaacagaa
961 gaaactttat ttgaaattca gggaattgac cccatagctt cagctataca aaaccttaaa
1021 acaactgaca aaacaaagcc ctcaaatctc gtaaacactt gtatcaggac aactctggat
1081 agagctgcgt gtttgccacc tggagaccat aatgcattat atgtaaatag cttcccactt
1141 ctggacccat ctgatgcacc ttttccctca ctcgattccc cgggaaaagc aatccgagga
1201 ccacagcagc ccatttggaa gccctttcct aatcaagaca gtgactcggt ggtactaagt
1261 ggcacagact cagaactgca tatacctcga gtatgtgaat tctgtcaagc agttttccca
1321 ccatccatta catccagggg ggatttcctt cggcatctta attcacactt caatggagag
1381 acttaa
//