LOCUS AK312902 2040 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93348, highly similar to Homo sapiens
protein phosphatase 1D magnesium-dependent, delta isoform (PPM1D),
mRNA.
ACCESSION AK312902
VERSION AK312902.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2040)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2040
/clone="BRAWH3039765"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000431768"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 223..2040
/note="highly similar to Homo sapiens protein phosphatase
1D magnesium-dependent, delta isoform (PPM1D), mRNA"
/protein_id="BAG35748.1"
/translation="MAGLYSLGVSVFSDQGGRKYMEDVTQIVVEPEPTAEEKPSPRRS
LSQPLPPRPSPAALPGGEVSGKGPAVAAREARDPLPDAGASPAPSRCCRRRSSVAFFA
VCDGHGGREAAQFAREHLWGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWKKLAEW
PKTMTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHK
PELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALG
DLWSYDFFSGEFVVSPEPDTSVHTLDPQKHKYIILGSDGLWNMIPPQDAISMCQDQEE
KKYLMGEHGQSCAKMLVNRALGRWRQRMLRADNTSAIVICISPEVDNQGNFTNEDELY
LNLTDSPSYNSQETCVMTPSPCSTPPVKSLEEDPWPRVNSKDHIPALVRSNAFSENFL
EVSAEIARENVQGVVIPSKDPEPLEENCAKALTLRIHDSLNNSLPIGLVPTNSTNTVT
DQKNLKMSTPGQMKAQEIERTPPTNFKRTLEESNSGPLMKKHRRNGLSRSSGAQPASL
PTTSQRKNSVKLTMRRRLRGQKKIGNPLLHQHRKTVCVC"
BASE COUNT 506 a 537 c 556 g 441 t
ORIGIN
1 agtgcgcagg cgcaactgcc tggctctgct cgctccggcg ctccggccca gctctcgcgg
61 acaagtccag acatcgcgcg cccccccttc tccgggtccg ccccctcccc cttctcggcg
121 tcgtcgaaga taaacaatag ttggccggcg agcgcctagt gtgtctcccg ccgccggatt
181 cggcgggctg cgtggggccg gcgggatccc ggccagccgg ccatggcggg gctgtactcg
241 ctgggagtga gcgtcttctc cgaccagggc gggaggaagt acatggagga cgttactcaa
301 atcgttgtgg agcccgaacc gacggctgaa gaaaagccct cgccgcggcg gtcgctgtct
361 cagccgttgc ctccgcggcc gtcgccggcc gcccttcccg gcggcgaagt ctcggggaaa
421 ggcccagcgg tggcagcccg agaggctcgc gaccctctcc cggacgccgg ggcctcgccg
481 gcacctagcc gctgctgccg ccgccgttcc tccgtggcct ttttcgccgt gtgcgacggg
541 cacggcgggc gggaggcggc acagtttgcc cgggagcact tgtggggttt catcaagaag
601 cagaagggtt tcacctcgtc cgagccggct aaggtttgcg ctgccatccg caaaggcttt
661 ctcgcttgtc accttgccat gtggaagaaa ctggcggaat ggccaaagac tatgacgggt
721 cttcctagca catcagggac aactgccagt gtggtcatca ttcggggcat gaagatgtat
781 gtagctcacg taggtgactc aggggtggtt cttggaattc aggatgaccc gaaggatgac
841 tttgtcagag ctgtggaggt gacacaggac cataagccag aacttcccaa ggaaagagaa
901 cgaatcgaag gacttggtgg gagtgtaatg aacaagtctg gggtgaatcg tgtagtttgg
961 aaacgacctc gactcactca caatggacct gttagaagga gcacagttat tgaccagatt
1021 ccttttctgg cagtagcaag agcacttggt gatttgtgga gctatgattt cttcagtggt
1081 gaatttgtgg tgtcacctga accagacaca agtgtccaca ctcttgaccc tcagaagcac
1141 aagtatatta tattggggag tgatggactt tggaatatga ttccaccaca agatgccatc
1201 tcaatgtgcc aggaccaaga ggagaaaaaa tacctgatgg gtgagcatgg acaatcttgt
1261 gccaaaatgc ttgtgaatcg agcattgggc cgctggaggc agcgtatgct ccgagcagat
1321 aacactagtg ccatagtaat ctgcatctct ccagaagtgg acaatcaggg aaactttacc
1381 aatgaagatg agttatacct gaacctgact gacagccctt cctataatag tcaagaaacc
1441 tgtgtgatga ctccttcccc atgttctaca ccaccagtca agtcactgga ggaggatcca
1501 tggccaaggg tgaattctaa ggaccatata cctgccctgg ttcgtagcaa tgccttctca
1561 gagaattttt tagaggtttc agctgagata gctcgagaga atgtccaagg tgtagtcata
1621 ccctcaaaag atccagaacc acttgaagaa aattgcgcta aagccctgac tttaaggata
1681 catgattctt tgaataatag ccttccaatt ggccttgtgc ctactaattc aacaaacact
1741 gtcacggacc aaaaaaattt gaagatgtca actcctggcc aaatgaaagc ccaagaaatt
1801 gaaagaaccc ctccaacaaa ctttaaaagg acattagaag agtccaattc tggccccctg
1861 atgaagaagc atagacgaaa tggcttaagt cgaagtagtg gtgctcagcc tgcaagtctc
1921 cccacaacct cacagcgaaa gaactctgtt aaactcacca tgcgacgcag acttaggggc
1981 cagaagaaaa ttggaaatcc tttacttcat caacacagga aaactgtttg tgtttgctga
//