LOCUS AK312480 1002 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ92839, highly similar to Homo sapiens
claudin 12 (CLDN12), mRNA.
ACCESSION AK312480
VERSION AK312480.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1002)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1002
/clone="BRHIP3027971"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000431346"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 268..1002
/note="highly similar to Homo sapiens claudin 12
(CLDN12), mRNA"
/protein_id="BAG35384.1"
/translation="MGCRDVHAATVLSFLCGIASVAGLFAGTLLPNWRKLRLITFNRN
EKNLTVYTGLWVKCARYDGSSDCLMYDTTWYSSVDQLDLRVLQFALPLSMLIAMGALL
LCLIGMCNTAFRSSVPNIKLAKCLVNSAGCHLVAGLLFFLAGTVSLSPSIWVIFYNTH
LNKKFEPVFSFDYAVYVTIASAGGLFMTSLILFIWYCTCKSLPSPFWQPLYSHPPSMH
TYSQPYSARSRLSAIEIDIPVVSHTT"
BASE COUNT 222 a 269 c 233 g 278 t
ORIGIN
1 gtgtacctcg ctgggaacgc acttcctggg acgctgagag ggagacgctc caagaggctc
61 ctcagtgtgg gcgagtaaaa tgccctgcgt gtgagaagca ggctcagatt attgctactc
121 tgtattcaga tcttcatgtg tctcttctaa gctgaataaa gctgttttgg aactgtcagg
181 tacctcaaag catgaagaaa acgaggcaca gggaagttct gaatctggcc caagtctgac
241 tgacagtact ccacaagctt gcctgccatg ggctgtcggg atgtccacgc agccacagtc
301 ctttccttcc tgtgtggaat cgcctcagta gcaggcctct ttgcagggac tctgcttccc
361 aactggagaa aattacgatt gatcacattc aacagaaacg agaagaacct gactgtttac
421 acaggcctgt gggtgaaatg tgcccggtat gacgggagca gtgactgcct gatgtacgac
481 actacttggt actcatcagt tgaccagctg gacctgcgtg tcctccagtt tgccctaccc
541 ctcagcatgc tgatcgccat gggtgccctg ctgctctgcc tgattggaat gtgcaacact
601 gccttcaggt cctcggtgcc caacatcaaa ctggccaagt gtctggtcaa tagtgcaggt
661 tgccacctgg tggctgggct gctatttttc ctggcaggta ctgtgagcct ctccccatct
721 atctgggtca tcttttataa cacccatctg aacaagaagt ttgagccagt cttttcattt
781 gactatgcag tgtatgtcac tattgctagt gctgggggcc tgtttatgac ttcccttata
841 ctatttattt ggtattgtac atgcaaatct ttgccttctc ctttctggca accattgtac
901 tcccatccac ccagtatgca tacttactca cagccctatt cagcacgctc tcgcctctct
961 gccattgaaa ttgacattcc agtagtttca cacaccactt aa
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