LOCUS AK312258 1963 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ92553, highly similar to Homo sapiens lamin
B receptor (LBR), mRNA.
ACCESSION AK312258
VERSION AK312258.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1963)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1963
/cell_type="normal astrocytes (NHA5732)"
/clone="ASTRO3000218"
/clone_lib="ASTRO3"
/db_xref="H-InvDB:HIT000431124"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal astrocytes"
/organism="Homo sapiens"
CDS 116..1963
/note="highly similar to Homo sapiens lamin B receptor
(LBR), mRNA"
/protein_id="BAG35190.1"
/translation="MPSRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDG
TELELKENDIKPLTSFRQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASH
QADIKEARREVEVKLTPLILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFNLSQESS
YIATQYSLRPRREEVKLKEIDSKEEKYVAKELAVRTFEVTPIRAKDLEFGGVPGVFLI
MFGLPVFLFLLLLMCKQKDPSLLNFPPPLPALYELWETRVFGVYLLWFLIQVLFYLLP
IGKVVEGTPLIDGRRLKYRLNGFYAFILTSAVIGTSLFQGVEFHYVYSHFLQFALAAT
VFCVVLSVYLYMRSLKAPRNDLSPASSGNAVYDFFIGRELNPRIGTFDLKYFCELRPG
LIGWVVINLVMLLAEMKIQDRAVPSLAMILVNSFQLLYVVDALWNEEALLTTMDIIHD
GFGFMLAFGDLVWVPFIYSFQAFYLVSHPNEVSWPMASLIIVLKLCGYVIFRGANSQK
NAFRKNPSDPKLAHLKTIHTSTGKNLLVSGWWGFVRHPNYLGDLIMALAWSLPCGFNH
ILPYFYIIYFTMLLVHREARDEYHCKKKYGVAWEKYCQRVPYRIFPYIY"
BASE COUNT 501 a 426 c 464 g 572 t
ORIGIN
1 gagagcgcgg ccgggtagcg tcgcgcgcgt ggatctgccg ccgggttgct gtgcgactat
61 tctccgggag ccgtccgtgt caccgccgga acctggcgca ggttaattat agaaaatgcc
121 aagtaggaaa tttgccgatg gtgaagtggt aagaggtcga tggcctggga gttcacttta
181 ttatgaagta gaaattctga gccacgacag cacctcccag ctttacactg taaagtataa
241 agatggaaca gagcttgaat tgaaagagaa tgatattaag cctttaactt cctttaggca
301 aaggaaaggt ggctcaactt ccagttcccc ttccagacgc cgagggagtc gatcaaggtc
361 acgctcccga tcccccggtc gaccacctaa aagtgcccgc cgatctgctt ctgcttccca
421 ccaggccgac attaaggaag caaggaggga agtggaagtt aaattgactc cgctgattct
481 gaagccattt ggaaatagca tcagcagata taatggggag cctgagcata ttgagagaaa
541 tgacgcacct cataaaaata cacaggaaaa attcaatttg tcacaagaaa gcagttacat
601 agcaacacag tatagccttc gtccaagaag agaagaagtc aaattaaaag aaatagattc
661 taaggaagaa aaatacgttg caaaagaact ggcagtgaga acctttgaag tgacccccat
721 ccgggcaaag gacttggagt ttggaggagt acctggtgtg tttctcatca tgtttggcct
781 gcctgtgttc ctcttcctgt tgctgttgat gtgtaaacag aaagatccca gtcttctgaa
841 tttccctcct cctttgccag ctttgtatga gttatgggaa accagagtat ttggggtcta
901 cctcctgtgg tttttgattc aagtcctgtt ctacctactg ccaattggaa aggttgtgga
961 aggaacgcct cttattgatg gaagaagact caagtataga ttaaatggat tctatgcttt
1021 tatcctgaca tctgcagtca tcggaacatc tctcttccag ggcgtagagt ttcattacgt
1081 gtacagtcat tttcttcagt ttgcacttgc ggccactgtt ttttgtgtgg tcttgagtgt
1141 gtatctctac atgcgctctt tgaaagcgcc ccggaatgac ctgtcgcctg ccagctctgg
1201 aaatgctgtc tatgatttct tcattggccg tgaattaaac cctcgaattg gtacttttga
1261 tctcaaatac ttttgtgaat tgcgccccgg attgattgga tgggtggtta ttaacttggt
1321 gatgcttttg gctgaaatga aaatacagga ccgcgctgtt ccatccttgg ccatgatttt
1381 agttaatagt ttccagcttc tctatgtggt ggatgctctc tggaatgagg aagcgttgtt
1441 gacgaccatg gacatcatcc acgatggatt tggattcatg ctggcttttg gagacttggt
1501 gtgggttccc tttatttaca gcttccaagc cttttattta gtcagtcatc caaatgaagt
1561 gtcttggcca atggcttctc taattattgt tctgaaactt tgtggttatg taatcttccg
1621 aggtgcaaat tctcagaaaa atgcattccg gaaaaatccc agtgatccaa agcttgcaca
1681 tttaaaaacc attcatactt caacgggaaa aaatcttcta gtttctggat ggtggggctt
1741 tgttcgccac cccaattact tgggtgatct catcatggcc ttggcgtggt ccctcccatg
1801 tggttttaac cacattctgc cttatttcta cataatttat ttcaccatgt tgcttgtcca
1861 ccgagaagct cgtgacgagt accactgtaa gaagaaatac ggcgtggctt gggaaaagta
1921 ctgtcagcgt gtgccctacc gtatatttcc atacatctac taa
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