LOCUS AK303364 2869 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ59648 complete cds, highly similar to Dysferlin. ACCESSION AK303364 VERSION AK303364.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2869) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2869 /clone="THYMU3011001" /clone_lib="THYMU3" /db_xref="H-InvDB:HIT000497988" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="thymus" CDS 156..2690 /codon_start=1 /note="highly similar to Dysferlin" /protein_id="BAH13950.1" /transl_table=1 /translation="MSVMRVMGALGDKHMTRALFSSLQPAIHHIPGFEVQETSRILDE SEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV ECGGQTVQSCVIRNLRKNPNFDICTLFMEVMLPREELYCPPITVKVIDNRQFGRRPVV GQCTIRSLESFLCDPYSAESPSPQGGPDDVSLLSPGEDVLIDIDDKEPLIPIQLADGL SSLAPTNTASPPSSPHEEEFIDWWSKFFASIGEREKCGSYLEKDFDTLKVYDTQLENV EAFEGLSDFCNTFKLYRGKTQEETEDPSVIGEFKGLFKIYPLPEDPAIPMPPRQFHQL AAQGPQECLVRIYIVRAFGLQPKDPNGKCDPYIKISIGKKSVSDQDNYIPCTLEPVFG KMFELTCTLPLEKDLKITLYDYDLLSKDEKIGETVVDLENRLLSKFGARCGLPQTYCV SGPNQWRDQLRPSQLLHLFCQQHRVKAPVYRTDRVMFQDKEYSIEEIEAGRIPNPHLG PVEERLALHVLQQQGLVPEHVESRPLYSPLQPDIEQGKLQMWVDLFPKALGRPGPPFN ITPRRARRFFLRCIIWNTRDVILDDLSLTGEKMSDIYVKGWMIGFEEHKQKTDVHYRS LGGEGNFNWRFIFPFDYLPAEQVCAIAKKDAFWRLDKTESKIPARVVFQIWDNDKFSF DDFLGSLQLDLNRMPKPAKTAKKCSLDQLDDAFHPEWFVSLFEQKTVKGWWPCVAEEG EKKILAGKLEMTLEIVAESEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKT MKFILWRRFRWAIILFIILFILLLFLAIFIYAFPNYAAMKLVKPFS" BASE COUNT 658 a 825 c 780 g 606 t ORIGIN 1 agtatgatgt gaacccgaat atgtagactg aataggagta gggctgctct gggtgaagtg 61 tctggaggaa tgggcacagt gccagcctag catcccttct accctcaagg aatagaggct 121 gcaaaccatg gactgtctga tcactgacat agtccatgag tgtcatgagg gtgatggggg 181 ccttaggtga caagcacatg accagagctc tcttttcttc actccagccg gccatccacc 241 atattcctgg ttttgaggtg caggagacat caaggatcct ggatgagtct gaggacacag 301 acctgcccta cccaccaccc cagagggagg ccaacatcta catggttcct cagaacatca 361 agccagcgct ccagcgtacc gccatcgaga tcctggcatg gggcctgcgg aacatgaaga 421 gttaccagct ggccaacatc tcctccccca gcctcgtggt agagtgtggg ggccagacgg 481 tgcagtcctg tgtcatcagg aacctccgga agaaccccaa ctttgacatc tgcaccctct 541 tcatggaagt gatgctgccc agggaggagc tctactgccc ccccatcacc gtcaaggtca 601 tcgataaccg ccagtttggc cgccggcctg tggtgggcca gtgtaccatc cgctccctgg 661 agagcttcct gtgtgacccc tactcggcgg agagtccatc cccacagggt ggcccagacg 721 atgtgagcct actcagtcct ggggaagacg tgctcatcga cattgatgac aaggagcccc 781 tcatccccat ccagcttgca gacggtctgt cgagcttggc ccccactaac acggcttctc 841 ctccatccag tcctcatgag gaagagttca tcgattggtg gagcaaattc tttgcctcca 901 taggggagag ggaaaagtgc ggctcctacc tggagaagga ttttgacacc ctgaaggtct 961 atgacacaca gctggagaat gtggaggcct ttgagggcct gtctgacttt tgtaacacct 1021 tcaagctgta ccggggcaag acgcaggagg agacagaaga tccatctgtg attggtgaat 1081 ttaagggcct cttcaaaatt tatcccctcc cagaagaccc agccatcccc atgcccccaa 1141 gacagttcca ccagctggcc gcccagggac cccaggagtg cttggtccgt atctacattg 1201 tccgagcatt tggcctgcag cccaaggacc ccaatggaaa gtgtgatcct tacatcaaga 1261 tctccatagg gaagaaatca gtgagtgacc aggataacta catcccctgc acgctggagc 1321 ccgtatttgg aaagatgttc gagctgacct gcactctgcc tctggagaag gacctaaaga 1381 tcactctcta tgactatgac ctcctctcca aggacgaaaa gatcggtgag acggtcgtcg 1441 acctggagaa caggctgctg tccaagtttg gggctcgctg tggactccca cagacctact 1501 gtgtctctgg accgaaccag tggcgggacc agctccgccc ctcccagctc ctccacctct 1561 tctgccagca gcatagagtc aaggcacctg tgtaccggac agaccgtgta atgtttcagg 1621 ataaagaata ttccattgaa gagatagagg ctggcaggat cccaaaccca cacctgggcc 1681 cagtggagga gcgtctggct ctgcatgtgc ttcagcagca gggcctggtc ccggagcacg 1741 tggagtcacg gcccctctac agccccctgc agccagacat cgagcagggg aagctgcaga 1801 tgtgggtcga cctatttccg aaggccctgg ggcggcctgg acctcccttc aacatcaccc 1861 cacggagagc cagaaggttt ttcctgcgtt gtattatctg gaataccaga gatgtgatcc 1921 tggatgacct gagcctcacg ggggagaaga tgagcgacat ttatgtgaaa ggttggatga 1981 ttggctttga agaacacaag caaaagacag acgtgcatta tcgttccctg ggaggtgaag 2041 gcaacttcaa ctggaggttc attttcccct tcgactacct gccagctgag caagtctgtg 2101 ccattgccaa gaaggatgcc ttctggaggc tggacaagac tgagagcaaa atcccagcac 2161 gagtggtgtt ccagatctgg gacaatgaca agttctcctt tgatgatttt ctgggctccc 2221 tgcagctcga tctcaaccgc atgcccaagc cagccaagac agccaagaag tgctccttgg 2281 accagctgga tgatgctttc caccccgaat ggtttgtgtc cctttttgag cagaaaacag 2341 tgaagggctg gtggccctgt gtagcagaag agggtgagaa gaaaatactg gcgggcaagc 2401 tggaaatgac cttggagatt gtagcagaga gtgagcatga ggagcggcct gctggccagg 2461 gccgggatga gcccaacatg aaccctaagc ttgaggaccc aaggcgcccc gacacctcct 2521 tcctgtggtt tacctcccca tacaagacca tgaagttcat cctgtggcgg cgtttccggt 2581 gggccatcat cctcttcatc atcctcttca tcctgctgct gttcctggcc atcttcatct 2641 acgccttccc gaactatgct gccatgaagc tggtgaagcc cttcagctga ggactctcct 2701 gccctgtaga aggggccgtg gggtcccctc cagcatggga ctggcctgcc tcctccgccc 2761 agctcggcga gctcctccag acctcctagg cctgattgtc ctgccagggt gggcagacag 2821 acagatggac cggcccacac tcccagagtt gctaacatgg agctctgag //