LOCUS AK301866 1798 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55471 complete cds, highly similar to
Cytoplasmic dynein 1 intermediate chain 2.
ACCESSION AK301866
VERSION AK301866.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1798)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1798
/clone="TESTI2011628"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000496490"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 195..1280
/codon_start=1
/note="highly similar to Cytoplasmic dynein 1
intermediate chain 2"
/protein_id="BAG63305.1"
/transl_table=1
/translation="MHSISFLLDSSEQYPELLVASYNNNEDAPHEPDGVALVWNMKYK
KTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAA
HTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSM
SFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSH
LFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWN
LNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEW
ARFGRTLAEINANRADAEEEAATRIPA"
BASE COUNT 531 a 323 c 369 g 575 t
ORIGIN
1 tggacacata ttttaattaa atgttttaac attaaaacat ttaaaataat taactgttct
61 aatttaaaat tgtactaatg tcccagtagg cataatgcta gagatgtctc tcttgatgaa
121 atgttaggta tttgtatttg cagaataata atctgataaa gacaaataac taggattata
181 aaacagttct tattatgcat agcatttctt ttcttcttga ttcttctgag cagtatccgg
241 agttactcgt ggcttcctat aacaacaatg aagatgcccc tcatgagcct gatggtgtgg
301 cccttgtatg gaatatgaaa tacaaaaaaa ctaccccaga gtatgtgttt cactgccagt
361 cagctgtgat gtctgccaca tttgcaaaat ttcatccaaa tcttgttgtt ggtggtacat
421 attcaggcca aattgtgctt tgggataacc gtagcaataa aagaactcca gtgcaaagaa
481 ctccactgtc agcagctgca cacacacacc ctgtatattg tgtaaatgtt gttggaacac
541 aaaatgctca caatctgatt agcatctcta ctgatggaaa aatttgttca tggagtctgg
601 acatgctttc ccatccacag gatagcatgg agttggttca taaacagtca aaagcagtag
661 ctgtgacatc tatgtccttc cctgttggag atgtcaacaa ctttgttgtt gggagtgaag
721 aaggttctgt gtacacagca tgccgccatg gcagcaaagc tggaatcagt gagatgtttg
781 aggggcatca aggaccaatc actggcatcc attgtcatgc agctgttgga gcagtagact
841 tctcacatct ttttgtcact tcatcgtttg actggacagt aaagctttgg acaactaaga
901 ataacaagcc tttgtattca tttgaagata atgcagacta tgtttatgat gttatgtggt
961 cacctaccca cccagccctg tttgcctgtg tggatggcat ggggagattg gatttgtgga
1021 atctcaataa tgacacagag gtaccaactg ccagcatttc tgtggagggt aatcctgctc
1081 ttaatcgtgt gagatggacc cattctggca gagagattgc tgtgggtgat tctgaaggac
1141 agattgttat atacgatgtg ggagagcaga ttgctgttcc ccgcaatgat gaatgggcac
1201 ggtttggccg aacacttgca gaaattaatg caaaccgagc tgatgcagag gaggaagcag
1261 ctacccgaat acctgcttag ttcctgaaaa ggggagtgta actagtggat ttgggaaagg
1321 ttcttaagta gatcctgaga ctatttgcat gcttctgtct aaatgataat taaaaggaaa
1381 tttcatggat taaaccatgg gtttaatgca gcaatgaaac ttacaatgtc cctttatata
1441 taacatgcat cttgttttgg atttgtgtca ttttttaata tagctgattg acttcacaga
1501 aagcagcttt tttgaattct aatacatagg tgtatatttg gtattagtta ttttgagttc
1561 ttttcaactt ataacactgt atacagttat ttctaaagca cagatgaaat aagttctgca
1621 tatttttaaa taatcacagt tccctgttat acagataatg ttctcactac ccataatatg
1681 taggaacatt gtttctcctt agccgtagta tgcatacacc tatccatgtt cattctgaca
1741 tcctttgttg tctttataat tcatgtggta gttacctata aataaaaaca aatatgcg
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