LOCUS AK301395 1532 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60179 complete cds, highly similar to
Granulocyte-macrophage colony-stimulating factor receptor alpha
chain precursor.
ACCESSION AK301395
VERSION AK301395.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1532)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1532
/clone="SYNOV2013454"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000496019_02"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 345..1148
/codon_start=1
/note="highly similar to Granulocyte-macrophage
colony-stimulating factor receptor alpha chain precursor"
/protein_id="BAG62930.1"
/transl_table=1
/translation="MNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVG
CHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLV
RWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHS
VKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLR
IQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT"
BASE COUNT 411 a 375 c 392 g 354 t
ORIGIN
1 aggagcggga gtctccgaga gaagaaaagc aggtggaagg agaggaagcg gatgccgtgg
61 ggctcttccc ttctctctga ccagcaccat gcttctcctg gtgacaagcc ttctgctctg
121 tgagttacca cacccagcat tcctcctgat cccagagaaa tcggctcagt aacaacgaat
181 gttcgtgcac atttcgtgaa atttgtctgc atgaaggagt cacatttgag gttcacgtga
241 atactagtca aagaggattt caacagaaac tgctttatcc aaattcagga agggagggta
301 ccgctgctca gaatttctcc tgtttcatct acaatgcgga tttaatgaac tgtacctggg
361 cgaggggtcc gacggccccc cgtgacgtcc agtatttttt gtacatacga aactcaaaga
421 gaaggaggga gatccggtgt ccttattaca tacaggactc aggaacccat gtgggatgtc
481 acctggataa cctgtcagga ttaacgtctc gcaattactt tctggttaac ggaaccagcc
541 gagaaattgg catccaattc tttgattcac ttttggacac aaagaaaata gaacgattca
601 accctcccag caatgtcacc gtacgttgca acacgacgca ctgcctcgta cggtggaaac
661 agcccaggac ctatcagaag ctgtcgtacc tggactttca gtaccagctg gacgtccaca
721 gaaagaatac ccagcctggc acggaaaacc tactgattaa tgtttctggt gatttggaaa
781 atagatacaa ctttccaagc tctgagccca gagcaaaaca cagtgtgaag atcagagctg
841 cagacgtccg catcttgaat tggagctcct ggagtgaagc cattgaattt ggttctgacg
901 acgggaacct cggctctgtg tacatttatg tgctcctaat cgtgggaacc cttgtctgtg
961 gcatcgtcct cggcttcctc tttaaaaggt tccttaggat acagcggctg ttcccgccag
1021 ttccacagat caaagacaaa ctgaatgata accatgaggt ggaagacgag atcatctggg
1081 aggaattcac cccagaggaa gggaaaggct accgcgaaga ggtcttgacc gtgaaggaaa
1141 ttacctgaga cccagagggt gtaggaatgg catggacatc tccgcctccg cgacacgggg
1201 gaactgtttt cttgatgatg ctgtgaacct ttatatcatt ttctatgttt ttatttaaaa
1261 acatgacatt tggggccagg cgcggtggct cacgcctgta atcccagcac tttgggaggc
1321 caaggcaggc ggatcacctg aggtcaggag ttcaagacca gcctgcccaa catggtgaaa
1381 ccccatctgg actaaaaatg cagaaattta cccaggcacg gcggcggacg cccatcatcc
1441 cagctacttg ggaggctgag gcaggagaat tgcttgaacc cgtgaggcgg aggttgtagt
1501 gagccaagat cgcaccattg cacaccaacc tg
//