LOCUS AK297407 3090 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ55581 partial cds, highly similar to AF4/FMR2 family member 3. ACCESSION AK297407 VERSION AK297407.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3090) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3090 /clone="FCBBF3022318" /clone_lib="FCBBF3" /db_xref="H-InvDB:HIT000492031" /db_xref="taxon:9606" /dev_stage="fetal" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="brain" CDS 26..>3090 /codon_start=1 /note="highly similar to AF4/FMR2 family member 3" /protein_id="BAH12572.1" /transl_table=1 /translation="MTLRLDAGGIPSLAPRVYISGSPSQRFLPRKRNKGESAGRDSLL AGSARFGSRGEAQLQGSELLSRNSGESLVRIRSCGQELITCLSRPETGGKFEVDTQRP VCPPSRARAARASAAAVAAAATLTPPTMDSFDLALLQEWDLESLWGEDILNQRNDSLV VEFQSSASRCRSVYEPDRNALRRKERERRNQETQQDDGTFNSSYSLFSEPYKTNKGDE LSNRIQNTLGNYDEMKDFLTDRSNQSHLVGVPKPGVPQTPVNKIDEHFVADSRAQNQP SSICSTTTSTPAAVPVQQSKRGTMGWQKAGHPPSDGQQRATQQGSLRTLLGDGVGRQQ PRAKQVCNVEVGLQTQERPPAMAAKHSSSGHRVQNFPPSLASKPSLVQQKPTAYVRPM DGQDQAPDESPKLKSSSETSVHCTSYRGVPASKPEPARAKAKLSKFSIPKQGEESRSG ETNSCVEEIIREMTWLPPLSAIQAPGKVEPTKFPFPNKDSQLVSSGHNNPKKGDAEPE SPDNGTSNTSMLEDDLKLSSDEEENEQAAQRTALRALSDSAVVQQPNCRTSVPSSKGS SSSSSSGSSSSSSDSESSSGSDSETESSSSESEGSKPPHFSSPEAEPASSNKWQLDKW LNKVNPHKPPILIQNESHGSESNQYYNPVKEDVQDCGKVPDVCQPSLREKEIKSTCKE EQRPRTANKAPGSKGVKQKSPPAAVAVAVSAAAPPPAVPCAPAENAPAPARRSAGKKP TRRTERTSAGDGANCHRPEEPAAADALGTSVVVPPEPTKTRPCGNNRASHRKELRSSV TCEKRRTRGLSRIVPKSKEFIEAESSSSSSSSDSDLESEQEEYPLSKAQTVAASASSG NDQRLKEAAANGGSGPRAPVGSINARTTSDIAKELEEQFYTLVPFGRNELLSPLKDSD EIRSLWVKIDLTLLSRIPEHLPQEPGVLSAPATKDSESAPPSHTSDTPAEKALPKSKR KRKCDNEDDYREIKKSQGEKDSSSRLATSTSNTLSANHCNMNINSVAIP" BASE COUNT 801 a 905 c 872 g 512 t ORIGIN 1 attcggaggt gggtgaggtg agaggatgac tcttcggctt gacgctggag ggatcccgtc 61 acttgcaccc agggtttaca tttctggcag ccccagtcag cggttcttgc ccagaaaaag 121 gaacaaaggg gagagtgctg gaagggactc ccttttggcg gggagtgcga ggtttggttc 181 gcgtggtgag gcacaactgc agggctctga gctgctctct aggaattctg gggaatccct 241 ggtgagaatc cggagctgtg gccaagagct gatcacctgc ctttccagac cggagacggg 301 cggcaagttt gaagtcgaca cccagaggcc agtttgtccc ccttcccgcg cgcgggcggc 361 ccgagcctcg gcggcggcgg tagcggcggc ggcgacgctg acacctccca ccatggacag 421 cttcgactta gccctgctcc aggaatggga cctcgagtca ctgtggggtg aagacatctt 481 aaaccagagg aatgactctc tagttgtgga atttcagtca tcagccagca gatgcaggag 541 tgtctatgaa ccagatagaa atgcattacg gaggaaagaa cgagaaagaa gaaatcaaga 601 aactcaacag gatgatggca cgtttaattc tagttactct ctcttcagtg agccctacaa 661 gactaacaag ggggatgaac tctccaaccg gatccagaac actttaggca attatgatga 721 aatgaaagac tttttaactg atagatccaa tcagagtcat ctcgttggag ttcccaaacc 781 tggggttcct cagactcctg tgaacaagat cgatgaacat tttgttgcag attcaagagc 841 ccagaaccag ccctcgtcta tctgtagcac tacaacttcc acaccagcag ctgtccccgt 901 gcagcagagt aagagaggca ctatgggctg gcagaaggct gggcacccac cctctgacgg 961 ccaacagaga gcaacacaac agggctctct caggaccttg cttggagatg gtgttggcag 1021 acagcagcct cgggccaaac aagtgtgcaa tgtggaggtg ggccttcaga cccaggagag 1081 gccacctgcc atggcggcca agcacagcag cagcggacac cgtgttcaga actttcctcc 1141 atccctagct tcaaaaccca gcctggtcca gcagaaaccg accgcgtatg tgaggccaat 1201 ggacggccaa gatcaggccc ctgatgagtc tcctaagctg aagtcgtctt cggaaaccag 1261 cgtgcactgc acatcataca ggggagtccc tgccagcaag ccggagcctg ccagagccaa 1321 ggccaagctc tccaagttca gcatccccaa gcagggggag gagagtagat ctggagaaac 1381 caacagctgt gttgaagaaa taatccggga gatgacctgg cttccaccac tttctgctat 1441 tcaagcacct ggcaaagtgg aaccaaccaa atttccattt ccaaataagg actctcagct 1501 tgtatcctct ggacacaata atccaaagaa aggtgatgca gagccagaga gtccagacaa 1561 tggcacatcg aatacatcaa tgctggaaga tgaccttaag ctaagcagtg atgaagagga 1621 gaatgaacag gcagctcaga gaacggctct ccgcgctctc tctgacagcg ctgtggtcca 1681 gcagcccaac tgcagaacct cggtgccttc cagcaagggc agcagcagca gcagcagcag 1741 cggcagcagc agctcctcca gcgactcaga gagcagctcc ggatctgact cggagaccga 1801 gagcagctcc agcgagagtg agggcagcaa gcccccccac ttctccagcc ccgaggctga 1861 accggcatcc tctaacaagt ggcagctgga taaatggcta aacaaagtta atccccacaa 1921 gcctcctatt ctgatccaaa atgaaagcca cgggtcagag agcaatcagt actacaaccc 1981 ggtgaaagag gacgtccagg actgtgggaa agtccccgac gtttgccagc ccagcctgag 2041 agagaaggag atcaagagca cttgcaagga ggagcaaagg ccaaggacag ccaacaaggc 2101 ccctgggagt aaaggcgtga agcagaagtc cccgcccgcg gccgtggccg tggcggtgag 2161 cgcagccgcc ccgccacccg cagtgccctg tgcgcccgcg gagaacgcgc ccgcgcctgc 2221 ccggaggtcc gcgggcaaga agcccaccag gcgcaccgag aggacctcag ccggggacgg 2281 cgccaactgc caccggcccg aggagcccgc ggccgcggac gcgctgggga cgagcgtggt 2341 ggtccccccg gagcccacca aaaccaggcc ctgtggcaac aacagagcga gccaccgcaa 2401 ggagctgcgc tcctccgtga cctgcgagaa gcgccgcacg cgggggctaa gcaggatcgt 2461 ccccaaatcc aaggagttca ttgaggcaga gtcgtcatct tcatcctcct cctcggactc 2521 cgacctggag tccgagcagg aggagtaccc tctgtccaaa gcacagaccg tggctgcctc 2581 tgcctcctcc gggaatgatc agaggctgaa ggaggccgct gccaacgggg gcagtggtcc 2641 tagggcccct gtaggctcca tcaacgccag gaccaccagt gacatcgcca aggagctgga 2701 ggagcagttc tacacactgg tcccctttgg ccggaacgaa cttctctccc ctctaaagga 2761 cagtgatgag atcaggtctc tctgggtcaa aatcgacctg accctcctgt ccaggatccc 2821 agaacacctg ccccaggagc caggggtatt gagcgcccct gccaccaagg actctgagag 2881 cgcaccgccc agccacacct cggacacacc tgcagaaaag gctttgccaa aatccaagag 2941 gaaacgcaag tgtgacaacg aagacgacta cagggagatc aagaagtccc agggagagaa 3001 agacagctct tcaagactgg ccacctccac cagtaatact ttgtctgcaa accactgcaa 3061 catgaacatc aacagtgtgg caataccaat //