LOCUS AK295670 3594 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59537 complete cds, highly similar to Guanine
nucleotide exchange factor DBS.
ACCESSION AK295670
VERSION AK295670.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3594)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3594
/clone="BRHIP3009891"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000490294"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 2..3379
/codon_start=1
/note="highly similar to Guanine nucleotide exchange
factor DBS"
/protein_id="BAG58528.1"
/transl_table=1
/translation="MRFWLRTEEMALEEMVQRLNAVSKHTDEIMHQDIVPLCAADIQD
QLKKRFAYLSGGRGQDGSPVITFPDYPAFSEIPDKEFQNVMTYLTSIPSLQDAGIGFI
LVIDRRRDKWTSVKASVLRIAASFPANLQLVLVLRPTGFFQRTLSDIAFKFNRDDFKM
KVPVIMLSSVPDLHGYIDKSQLTEDLGGTLDYCHSRWLCQRTAIESFALMVKQTAQML
QSFGTELAETELPNDVQSTSSVLCAHTEKKDKAKEDLRLALKEGHSVLESLRELQAEG
SEPSVNQDQLDNQATVQRLLAQLNETEAAFDEFWAKHQQKLEQCLQLRHFEQGFREVK
AILDAASQKIATFTDIGNSLAHVEHLLRDLASFEEKSGVAVERARALSLDGEQLIGNK
HYAVDSIRPKCQELRHLCDQFSAEIARRRGLLSKSLELHRRLETSMKWCDEGIYLLAS
QPVDKCQSQDGAEAALQEIEKFLETGAENKIQELNAIYKEYESILNQDLMEHVRKVFQ
KQASMEEVFHRRQASLKKLAARQTRPVQPVAPRPEALAKSPCPSPGIRRGSENSSSEG
GALRRGPYRRAKSEMSESRQGRGSAGEEEESLAILRRHVMSELLDTERAYVEELLCVL
EGYAAEMDNPLMAHLLSTGLHNKKDVLFGNMEEIYHFHNRIFLRELENYTDCPELVGR
CFLERMEDLQIYEKYCQNKPRSESLWRQCSDCPFFQECQRKLDHKLSLDSYLLKPVQR
ITKYQLLLKEMLKYSRNCEGAEDLQEALSSILGILKAVNDSMHLIAITGYDGNLGDLG
KLLMQGSFSVWTDHKRGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAP
SYSYKQSLNMAAVGITENVKGDAKKFEIWYNAREEVYIVQAPTPEIKAAWVNEIRKVL
TSQLQACREASQHRALEQSQSLPLPAPTSTSPSRGNSRNIKKLEERKTDPLSLEGYVS
SAPLTKPPEKGKGWSKTSHSLEAPEDDGGWSSAEEQINSSDAEEDGGLGLKKLVPGKY
TVVADHEKGGPDALRVRSGDVVELVQEGDEGLWYVRDPTTGKEGWVPASSLSVRLGPS
GSAQCLSSSESSPGSAVLSNSSSCSEGGQAPFSDLQG"
BASE COUNT 832 a 1026 c 1162 g 574 t
ORIGIN
1 gatgaggttt tggctgagga ctgaagagat ggccttggaa gaaatggtgc agagattaaa
61 tgcggtttcc aagcacacgg atgaaatcat gcaccaggac atcgtcccgc tctgtgctgc
121 cgacatccag gaccagctaa agaagcgctt tgcttacctg tccggtgggc gggggcagga
181 cggaagcccg gttatcacct tccctgacta cccggccttc agcgagattc cggacaagga
241 gttccagaat gtcatgacct acctcaccag catccccagc ctgcaggacg ctggcatcgg
301 attcatcctg gtgatagacc ggcgacggga caaatggacc tccgtgaagg cgtccgtcct
361 gcgcatcgca gcatctttcc cggcaaacct gcagctcgtc ctcgtgcttc gcccgacggg
421 ttttttccaa aggactctct ccgacatcgc tttcaaattc aatagagatg actttaagat
481 gaaggtgccg gtcataatgc tgagctccgt accagactta cacggttaca tcgataagtc
541 gcagctgacc gaggacctgg gtgggaccct ggactactgc cactcccggt ggctgtgcca
601 gcgcacggcc atcgaaagtt tcgccctcat ggtgaagcag acggctcaga tgctgcagtc
661 cttcgggacc gagctggctg aaacagagct gcccaatgac gtccagtcga caagctcagt
721 gctgtgtgcg cacacagaga agaaggacaa ggcgaaggag gatttgaggc tggcactgaa
781 agaggggcac agtgtcctgg agagcctcag ggagctgcag gctgagggct cagagcccag
841 tgtgaaccag gaccagcttg acaaccaggc caccgtgcag aggctcctgg cccagctgaa
901 cgaaaccgag gctgccttcg atgagttctg ggcaaagcat cagcagaaac tggagcagtg
961 tctgcagctc cggcactttg agcagggctt ccgggaggtc aaagccatct tggacgcagc
1021 gtcccagaag atagcaacct tcacagacat cggcaacagc ctggcgcatg tggagcacct
1081 gctgagggac ctggccagct tcgaggagaa atcaggcgtg gccgtggaga gggcccgggc
1141 cctgtctctg gacggcgagc agctcattgg gaacaagcac tacgcggtag actccatccg
1201 cccaaagtgc caggagctcc ggcacctctg tgaccagttc tctgcggaga tcgcaaggag
1261 gagggggctg ctcagcaagt ccctggagct gcaccgccgc ctggagacgt ccatgaagtg
1321 gtgtgatgaa gggatttacc tgctggcctc acaacctgtg gacaagtgcc agtcccagga
1381 cggcgcggag gctgccctcc aggaaatcga gaagtttttg gagaccggtg cggaaaataa
1441 gatccaggag ctcaacgcga tttacaagga atacgaatcc atcctcaacc aagatctcat
1501 ggagcacgtg cgaaaggtct tccagaagca ggcaagcatg gaggaggtgt tccaccgcag
1561 gcaggccagc ctgaagaagc tggcggccag gcagacgcgg cccgtgcagc cggtggcccc
1621 cagacccgag gcactggcaa agtcgccctg cccctcccca ggcattcggc gaggctctga
1681 gaactccagc tccgagggcg gtgcgctccg gagagggccc taccggaggg ccaagagtga
1741 gatgagtgag agccggcagg gccgcggctc agcgggggag gaggaggaaa gcctggccat
1801 cctgcgcagg cacgtgatga gcgagctcct ggacacagaa cgggcctacg tggaggagct
1861 gctgtgcgtc ctggagggct acgccgcgga gatggataac ccactgatgg ctcacctcct
1921 gtcaacaggc cttcacaaca agaaggatgt tttgtttgga aacatggagg aaatctatca
1981 cttccacaac aggatattcc tcagggagct ggaaaactac actgactgcc cagaactggt
2041 tggaagatgc tttctggaga ggatggaaga tctccagatc tatgagaagt actgtcagaa
2101 caagccccgc tctgagagcc tgtggagaca gtgctccgac tgcccgtttt tccaggaatg
2161 ccagagaaag ctggaccaca agctgagcct ggactcctac ctgctgaagc cagtgcagag
2221 gatcaccaag taccagctgc tgctcaagga aatgctgaaa tacagcagga actgcgaggg
2281 ggctgaggac ctgcaggagg cgctgagctc catcctgggc atcctgaagg ccgtgaacga
2341 ctccatgcac ctcatcgcta tcaccggcta tgacgggaat ctcggcgacc tgggcaagct
2401 gctgatgcag ggctcattca gcgtctggac cgaccacaag aggggccaca ccaaggtgaa
2461 ggagctggcc aggttcaagc ccatgcagcg gcacctgttc ctgcacgaga aggcagtgct
2521 cttctgcaag aagagggagg agaatgggga ggggtatgag aaagctccct cctacagcta
2581 caagcagtcc ttaaacatgg ctgccgttgg cattacggag aacgtgaagg gagatgctaa
2641 gaagttcgag atctggtaca acgcgcgcga ggaggtctac atcgtccagg cgccaactcc
2701 tgagattaaa gccgcgtggg tgaatgaaat tcggaaagtg ctgaccagcc agctgcaggc
2761 ttgtagagaa gccagccagc accgggcgct ggagcagtca cagagcctgc ccctgccggc
2821 cccgaccagc accagtccct caagaggaaa ctcaaggaac atcaagaagc tggaagaaag
2881 gaaaacagac cccctaagcc tggagggata cgtcagctca gcgccactga caaagccccc
2941 cgaaaagggc aaaggttgga gcaaaacgtc ccactcactg gaggcacctg aggacgacgg
3001 gggctggtca agtgcagagg agcagattaa ctcgtccgac gcagaggagg acggcgggtt
3061 gggcctcaag aagctggttc caggtaaata cacggtcgtg gcggaccacg agaagggagg
3121 ccccgatgcg ctgcgcgtga ggagcgggga cgtggtggag ctggtgcagg agggcgacga
3181 gggcctctgg tacgtcaggg acccgaccac tggcaaggag ggctgggtgc cggccagcag
3241 cctgtccgtc cggctcggcc cgtccggctc ggcccagtgc ctgagcagct cagagtcgag
3301 cccggggtcg gccgtgctga gcaactcgtc cagctgcagc gagggcggcc aggccccctt
3361 ctccgacctg caggggtagc gcggcctcgg cgccggagac ccgcgcgctg tctggggctg
3421 cggtggcgtg gggagggcgc ggcccccgga cgccccgagg aaggggcacc tcaccgcccc
3481 gacccagagc gcctggccgt gcgggctgca gaggacccct ccggggcaga ggcaggttcc
3541 acggaaaacc ccggcccgct ggggcttccc cggagactcc agagcccaca gagg
//