LOCUS AK294407 2384 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60486 complete cds, highly similar to
Mitochondrial Rho GTPase 1 (EC 3.6.5.-).
ACCESSION AK294407
VERSION AK294407.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2384)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2384
/clone="BRAMY2047235"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000489031"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 14..1966
/codon_start=1
/note="highly similar to Mitochondrial Rho GTPase 1 (EC
3.6.5.-)"
/protein_id="BAG57659.1"
/transl_table=1
/translation="MKKDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPA
DVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLIN
ERTDKDSRLPLILVGNKSDLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFY
YAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFN
TPLAPQALEDVKNVVRKHISDGVADSGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGY
DDDLDLTPEYLFPLLKIPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFK
VFPYIPWGPDVNNTVCTNERGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQ
ESQASAVTVTRDKKIDLQKKQTQRNVFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIR
EDHKSYYAINTVYVYGQEKYLLLHDISESEFLTEAEIICDVVCLVYDVSNPKSFEYCA
RIFKQHFMDSRIPCLIVAAKSDLHEVKQEYSISPTDFCRKHKMPPPQAFTCNTADAPS
KDIFVKLTTMAMYPEDHYRDRLSRDMGHTDRIENLRKIWVFLKTALHVTQADLKSSTF
WLRASFGATVFAVLGFAMYKALLKQR"
BASE COUNT 759 a 450 c 487 g 688 t
ORIGIN
1 gagagccgcc gacatgaaga aagacgtgcg gatcctgctg gtgggagaac ctagagttgg
61 gaagacatca ctgattatgt ctctggtcag cgaagaattt ccagaagagg ttcctccccg
121 ggcagaagaa atcaccattc cagctgatgt caccccagag agagttccaa cacacattgt
181 agattactca gaagcagaac agagtgatga acaacttcat caagaaatat ctcaggctaa
241 tgtcatctgt atagtgtatg ccgttaacaa caagcattct attgataagg taacaagtcg
301 atggattcct ctcataaatg aaagaacaga caaagacagc aggctgcctt taatattggt
361 tgggaacaaa tctgatctgg tggaatatag tagtatggag accatccttc ctattatgaa
421 ccagtataca gaaatagaaa cctgtgtgga gtgttcagcg aaaaacctga agaacatatc
481 agagctcttt tattacgcac agaaagctgt tcttcatcct acagggcccc tgtactgccc
541 agaggagaag gagatgaaac cagcttgtat aaaagccctt actcgtatat ttaaaatatc
601 tgatcaagat aatgatggta ctctcaatga tgctgaactc aacttctttc agaggatttg
661 tttcaacact ccattagctc ctcaagctct ggaggatgtc aagaatgtag tcagaaaaca
721 tataagtgat ggtgtggctg acagtgggtt gaccctgaaa ggttttctct ttttacacac
781 actttttatc cagagaggga gacacgaaac tacttggact gtgcttcgac gatttggtta
841 tgatgatgac ctggatttga cacctgaata tttgttcccc ctgctgaaaa tacctcctga
901 ttgcactact gaattaaatc atcatgcata tttatttctc caaagcacct ttgacaagca
961 tgatttggat agagactgtg ctttgtcacc tgatgagctt aaagatttat ttaaagtttt
1021 cccttacata ccttgggggc cagatgtgaa taacacagtt tgtaccaatg aaagaggctg
1081 gataacctac cagggattcc tttcccagtg gacgctcacg acttatttag atgtacagcg
1141 gtgcctggaa tatttgggct atctaggcta ttcaatattg actgagcaag agtctcaagc
1201 ttcagctgtt acagtgacaa gagataaaaa gatagacctg cagaaaaaac aaactcaaag
1261 aaatgtgttc agatgtaatg taattggagt gaaaaactgt gggaaaagtg gagttcttca
1321 ggctcttctt ggaagaaacc taatgaggca gaagaaaatt cgtgaagatc ataaatccta
1381 ctatgcgatt aacactgttt atgtatatgg acaagagaaa tacttgttgt tgcatgatat
1441 ctcagaatcg gaatttctaa ctgaagctga aatcatttgt gatgttgtat gcctggtata
1501 tgatgtcagc aatcccaaat cctttgaata ctgtgccagg atttttaagc aacactttat
1561 ggacagcaga ataccttgct taatcgtagc tgcaaagtca gacctgcatg aagttaaaca
1621 agaatacagt atttcaccta ctgatttctg caggaaacac aaaatgcctc caccacaagc
1681 cttcacttgc aatactgctg atgcccccag taaggatatc tttgttaaat tgacaacaat
1741 ggccatgtat ccagaggatc attacagaga cagactctcc cgagacatgg gccacactga
1801 tagaatagag aatttgagaa aaatctgggt ctttctaaaa actgctttgc acgtgacaca
1861 agctgacctc aagagctcca cgttttggct tcgagcaagt tttggtgcta ctgtttttgc
1921 agttttgggc tttgctatgt acaaagcatt attgaaacag cgatgatata aaaagaaata
1981 ctgtccctac caaaaacaaa tacttttatg tacattctga atgctttaag ttctgctaga
2041 attattgaga tatttataca tgcagagtta ctttattaat atttgtaatt catgcataag
2101 agtattttaa tgatagttat aactgcagta ttggctagca tatggaaaga aaacagctaa
2161 cagccaaact aaaatggcta aattccagag gccaaaaggg aatattttgt aaatatatgt
2221 acatattcag gcaagatatg gtctcccaag ctgagttcta gaaatgatgt ttctagacat
2281 ttctaagtgg tattgttagt gctcacttgg ctcactcttc taggtttaag ttagcccaga
2341 gattgtattt actcatggat cactttattt atttcacatt tact
//