LOCUS AK293991 1735 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56426 complete cds, weakly similar to Ninein.
ACCESSION AK293991
VERSION AK293991.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1735)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1735
/clone="BRACE3040226"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488615"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 327..1589
/codon_start=1
/note="weakly similar to Ninein"
/protein_id="BAH11644.1"
/transl_table=1
/translation="MKKKLKRPLNCAACYGMDEEENHYVSQLREVYSSCDTTGTGFLD
RQELTQLCLKLHLEQQLPVLLQTLLGNDHFARVNFEEFKEGFVAVLSSNAGVRPSDED
SSSLESAASSAIPPKYVNGSKWYGRRSRPELCDAATEARRVPEQQTQASLKSHLWRSA
SLESVESPKSDEEAESTKEAQNELFEAQGQLQTWDSEDFGSPQKSCSPSFDTPESQIR
GVWEELGVGSSGHLSEQELAVVCQSVGLQGLEKEELEDLFNKLDQDGDGKVSLEEFQL
GLFSHEPALLLESSTRVKPSKAWSHYQVPEESGCHTTTTSSLLSLCSSLRLFSSIDDG
SGFAFPDQVLAMWTQEGIQNGREILQSLDFSVDEKVNLLELTWALDNELMTVDSAVQQ
AALACYHQELSYQQGQVEQLARERDKAR"
BASE COUNT 422 a 429 c 502 g 382 t
ORIGIN
1 gacaacgtca tatgtctctg gggcagcatc cagtttgttt ggggacaggc ttttcccctc
61 tggatgaaaa caggattttc tttcacttgg tggcaaagtt tatgtttgta tcttaaatta
121 agctttatag cattaggatt attgagagcc tactcattcc agtttccaaa aatgaaacta
181 agagaaactg tgttgctttt tatctggaat attgccctca attttgtagc cagctgctga
241 atgctggcca gattttctgg tgattttgac atgcaaacat tttatgcaga tgtggaatac
301 caaggagtat taataattca gtttgcatga agaagaaact gaagaggcct ctgaactgcg
361 cagcctgcta tgggatggat gaagaagaga accactatgt ctcgcagctc agggaagtct
421 acagcagctg cgacaccacg gggactggct ttctggaccg ccaggagctg acccagctct
481 gccttaagct tcacctggag cagcagctgc ccgtcctcct gcagacgctt ctcggaaacg
541 accatttcgc cagggttaac tttgaggaat ttaaggaagg ttttgtggct gtgttgtctt
601 caaatgctgg tgttcgcccc tcagatgaag acagtagttc tttggaatca gctgcctcca
661 gtgccatccc tccaaagtat gtgaatggtt ctaagtggta tggccgtcgg agccggcctg
721 agctatgtga cgctgccaca gaagccagac gcgtgccgga gcagcaaacc caggccagcc
781 tgaaaagtca cctctggcgc tcagcgtctc tggagagcgt ggagagtccc aagtcagatg
841 aagaggccga gagcactaaa gaagctcaga atgaattatt tgaagcacaa ggacagctgc
901 agacctggga ttctgaggac tttgggagcc cccagaagtc ctgcagcccc tcctttgaca
961 ccccagagag ccagatccgg ggcgtgtggg aagagctggg ggtgggcagc agcggacacc
1021 tgagcgagca ggagctggct gtggtctgcc agagcgtcgg gctccaggga ctcgagaaag
1081 aggaactcga agacctgttt aacaaactgg atcaagacgg agacggcaaa gtgagtcttg
1141 aggaattcca gcttggcctc ttcagtcatg agcccgcgct acttctagag tcttccactc
1201 gggttaaacc gagcaaggct tggtctcatt accaggtccc agaggagagc ggctgccaca
1261 ccaccacaac ctcatccctc ttgtccctgt gctccagcct gcgcctcttc tccagcattg
1321 acgatggttc tggcttcgct tttcctgatc aggtcctggc catgtggacc caggagggga
1381 ttcagaatgg cagggagatc ttgcagagcc tggacttcag cgtggacgag aaggtgaacc
1441 ttctggagct gacctgggcc cttgacaacg agctcatgac agtggacagt gccgtccagc
1501 aggcagccct ggcctgctac caccaggagc tgagctacca gcaagggcag gtggagcagc
1561 tggcaaggga gcgtgacaag gcaaggtagg acctggagag ggccgagaag aggaacctgg
1621 agtttgtgaa agagatggac gactgccact ccaccctgga gcagctcacg gagaagaaaa
1681 tcaagcatct ggagcagggg taccgggaaa ggctgagcct cctgcggtct gaggt
//