LOCUS AK292576 2703 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77622 complete cds, highly similar to Homo
sapiens SH3 domain containing ring finger 2 (SH3RF2), mRNA.
ACCESSION AK292576
VERSION AK292576.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2703)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2703
/clone="TESTI4043786"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000425373"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 224..2413
/codon_start=1
/note="highly similar to Homo sapiens SH3 domain
containing ring finger 2 (SH3RF2), mRNA"
/protein_id="BAF85265.1"
/transl_table=1
/translation="MDDLTLLDLLECPVCFEKLDVTAKVLPCQHTFCKPCLQRVFKAH
KELRCPECRTPVFSNIEALPANLLLVRLLDGVRSGQSSGRGGSFRRPGTMTLQDGRKS
RTNPRRLQASPFRLVPNVRIHMDGVPRAKALCNYRGQNPGDLRFNKGDIILLRRQLDE
NWYQGEINGISGNFPASSVEVIKQLPQPPPLCRALYNFDLRGKDKSENQDCLTFLKDD
IITVISRVDENWAEGKLGDKVGIFPILFVEPNLTARHLLEKNKGRQSSCTKNLSLVSS
SSRGNTSTLRRGPGSRRKVPGQFSITTALNTLNRMVHSPSGRHMVEISTPVLISSSNP
SVITQPMEKADVPSSCVGQVSTYHPAPVSPGHSTAVVSLPGSQQHLSANMFVALHSYS
AHGPDELDLQKGEGVRVLGKCQDGWLRGVSLVTGRVGIFPNNYVIPIFRKTSSFPDSR
SPGLYTTWTLSTSSVSSQGSISEGDPRQSRPFKSVFVPTAIVNPVRSTAGPGTLGQGS
LRKGRSSMRKNGSLQRPLQSGIPTLVVGSLRRSPTMVLRPQQFQFYQPQGIPSSPSAV
VVEMGSKPALTGEPALTCISRGSEARIHSAASSLIMEDKEIPIKSEPLPKPPASAPPS
ILVKPENSRNGIEKQVKTVRFQNYSPPPTKHYTSHPTSGKPEQPATLKASQPEAASLG
PEMTVLFAHRSGCHSGQQTDLRRKSALAKATTLVSTASGTQTVFPSK"
BASE COUNT 649 a 829 c 695 g 530 t
ORIGIN
1 aaaagcggtt ggcagcagcg gcgcttggag gaaaggaagc cggttggagg gcgcagcgca
61 cccctgctgc gcggaggagg gggctgagct gaactcagca gaagttacat gcacaaggca
121 aaaattctga cgttctcaag agaccagctc tgcccccgtg gctcaactga ccctaccatg
181 tggacgctgc tcctccaggt gggaactgga gttttgaaat aaaatggatg atttgacgtt
241 acttgatctt ctggagtgcc ctgtgtgctt tgagaagctc gatgtcacag ccaaagtcct
301 cccttgccag cacaccttct gcaaaccatg tctacagagg gttttcaagg cccacaaaga
361 gctgcggtgc cccgaatgca ggacgcctgt gttttccaac attgaggcgc tgccggccaa
421 cctgctgctc gtgcgccttc tggatggagt gcgctcaggg cagagctccg ggagaggggg
481 ctccttccgc aggcctggca cgatgacctt gcaggatggc aggaaaagca ggaccaaccc
541 cagacgtctg caggccagtc ctttccggct agtgcctaat gtcagaatcc acatggatgg
601 ggtgcctcga gcaaaggcct tatgcaacta cagagggcag aatcccggtg acctaaggtt
661 taataaggga gatatcatcc ttctccggag acagcttgat gagaattggt accaggggga
721 aatcaatggc atcagcggga acttcccagc cagctccgtg gaagtcatca agcagctgcc
781 ccagccgccc ccgctctgca gggccctcta caacttcgac ctacgaggca aggacaagag
841 tgagaaccag gattgcctga ccttcctcaa ggacgatatc atcactgtga tcagccgagt
901 ggatgagaac tgggcagaag gcaagttagg agataaagta ggcatcttcc ctatcttgtt
961 tgtagagcca aacctcaccg caagacacct tttagagaag aacaaaggtc gccagtcatc
1021 ctgcacaaaa aacctgtccc tggtgtcctc gtcctccaga ggcaacacgt ctaccctccg
1081 taggggccca gggtccagga ggaaggtgcc tgggcagttt tccatcacaa cagccttgaa
1141 cactctcaac cggatggtcc attctccttc agggcgccat atggtagaga tcagcacccc
1201 agtgctcatc agctccagca acccctctgt gatcacccag cccatggaga aagcagacgt
1261 tccttccagc tgtgtgggac aggtcagcac ttatcacccc gcacctgtct ctccaggaca
1321 ttccacagcc gtggtcagtc tgcctggctc ccagcaacac ctctcagcga acatgtttgt
1381 agccctgcac tcctactcag cccatggacc cgatgagctg gacctgcaaa agggagaagg
1441 cgtcagggtc ctggggaagt gccaggacgg ctggctcagg ggcgtctcct tggtcaccgg
1501 gcgagtcggc atcttcccaa acaattacgt catccccatt ttcagaaaga cctctagttt
1561 tccagactcc cggagccctg gtctctacac cacatggacg ttatccacct cctctgtgtc
1621 ctcccaaggc agcatttcag aaggtgatcc acggcaaagc cgtcccttca aatccgtctt
1681 tgtgcccact gccatagtca accccgtgag aagcacagcc ggccctggga ctttaggaca
1741 agggtctctt cggaaagggc ggagcagcat gagaaagaat ggatccctgc agagacccct
1801 ccagtccggg atccccactc tcgtggtagg ctccctcaga cgcagcccca ccatggtcct
1861 tcggcctcag cagttccaat tctaccagcc acaggggatc ccctcctccc cctcagccgt
1921 ggtggtggag atggggtcca agcctgccct cacgggggag cccgccctca cgtgcatcag
1981 caggggcagt gaggcccgga tccactccgc ggccagctcc ctcattatgg aagacaaaga
2041 aatccccatc aagagtgagc ctctgccaaa accgcccgca tctgccccac catccatcct
2101 ggtgaaacca gaaaactcaa gaaatggcat cgaaaagcaa gtcaaaaccg tgagatttca
2161 gaattacagc cctcctccca ccaaacatta cacctcccat cccacctccg gaaagcctga
2221 acagccagcc accctcaagg cgtcccagcc tgaagcagcg tccttgggcc cagagatgac
2281 cgtcctattt gcccaccgaa gtggctgcca ctccggacag cagacagacc tccggagaaa
2341 gtcagctctt gccaaggcca caaccctggt gtccactgcc tcaggcacgc agaccgtgtt
2401 tcccagcaaa tgaacctacg ggtggctttt cctagacccc aaagaggtga attgcattta
2461 aatacagtct gcctccactg agggcatcct gccattcttt ggggacttga gcatgggtcc
2521 ttgttcttcc tatttcacct ccaggaaagc aaaagtggga gcagaaattc ctgccctggg
2581 tgggaggata gatggcgtgg ccttccaaac atacaaacat aatgatttga tgccacaaag
2641 ctcgcttact cagaccaagg agtgaaaaat tgtcgcgccc actttatgcc ccagcatgga
2701 gta
//