LOCUS AK291198 5023 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77126 partial cds, highly similar to Homo
sapiens zinc finger protein 638 (ZNF638), transcript variant 1,
mRNA.
ACCESSION AK291198
VERSION AK291198.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5023)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..5023
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8000267"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000423995"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 288..>5023
/codon_start=1
/note="ighly similar to Homo sapiens zinc finger protein
638 (ZNF638), transcript variant 1, mRNA"
/protein_id="BAF83887.1"
/transl_table=1
/translation="MSRPRFNPRGDFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRFYP
AGRARGIPHRFAGHESYQNMGPQRMNVQVTQHRTDPRLTKEKLDFHEAQQKKGKPHGS
RWDDEPHISASVAVKQSSVTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRY
PDEQLTPENMPLILRDIRMRKMGRRLPNLPSQSRNKETLGSEAVSSNVIDYGHASKYG
YTEDPLEVRIYDPEIPTDEVENEFQSQQNISASVPNPNVICNSMFPVEDVFRQMDFPG
ESSNNRSFFSVESGTKMSGLHISGGQSVLEPIKSVNQSINQTVSQTMSQSLIPPSMNQ
QPFSSELISSVSQQERIPHEPVINSSNVHVGSRGSKKNYQSQADIPIRSPFGIVKASW
LPKFSHADAQKMKRLPTPSMMNDYYAASPRIFPHLCSLCNVECSHLKDWIQHQNTSTH
IESCRQLRQQYPDWNPEILPSRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRS
RSPMHYMYRPRSRSPRICHRFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSR
RSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTS
ATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAVSLQRKLRKEQSLHYGSVLLITE
LPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIETTPLTIK
GKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADASKAVEIVTSTSAAKTGQA
KASVAKVNKSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKKSLEAKKTGNVKNKDSN
KPVTIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKETEEMCVMLVSNLPN
KGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMVKFYTCFPVLMDGNQL
SISMAPENMNIKDEEAIFITLVKENDPEANIDTIYDRFVHLDNLPEDGLQCVLCVGLQ
FGKVDHHVFISNRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLSPKIDLPEV
QIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEP
CEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQM
FNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVEAV
AEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKET
RMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSK
TSILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKE
FGLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETE
ARPSIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVN
PSQAKQNPLKGKRKETLKNVPFSELN"
BASE COUNT 1748 a 945 c 1064 g 1266 t
ORIGIN
1 agctttttcg gcgtcgagac tggaggctga gtgctaaact gtgtggggcg cggatgggat
61 ccagctgtta gtcgggtagg catagctttg tgttattctt ggaaaatttc gcaccacttg
121 tgaattcctt gaacctgggc attgcaaacc cacttctgtt gggcccatct cctttgcact
181 ttgctcagat taagactcag ttggcgcttc agcagctgaa tgccgttgcc tcacatggtt
241 caacaccacc ttatacttta ttaaatcagg ctttcttgaa aatagccatg tcgagaccca
301 ggtttaatcc tcgaggagac tttccacttc aaaggccacg agcacctaac ccttctggga
361 tgaggcctcc aggaccattt atgaggcctg gatctatggg tctcccaaga ttttacccag
421 cagggagagc acgtggaatt ccacacagat ttgctggcca tgaatcttat cagaacatgg
481 ggccacagag aatgaatgtt caggtaactc aacacagaac tgatccaaga ttgaccaaag
541 aaaaactgga ttttcatgaa gcacaacaga agaaggggaa gcctcatggt agccgttggg
601 atgatgagcc tcatatatct gcatcagtgg cagtgaaaca gagttctgta acacaggtta
661 cagagcagag tcccaaagta cagagccgct atacaaaaga gagtgcctca agtatcttag
721 caagttttgg attatctaat gaagacctag aagaacttag tcgctatcct gatgaacaac
781 taactcctga aaatatgcca ttaattttga gggatataag aatgcgaaaa atggggcgcc
841 gattacctaa tttaccttct cagagcagaa ataaagaaac acttggtagt gaagcagttt
901 caagtaatgt gatcgattat gggcatgcaa gcaaatatgg ctacacagaa gatccacttg
961 aagtacgtat ttatgatcct gaaattccaa ctgatgaggt cgagaatgaa tttcagtcac
1021 agcagaacat ttctgcatct gttcccaatc caaatgtgat atgtaattct atgtttcctg
1081 ttgaagacgt atttcgccaa atggacttcc ccggtgagtc ctccaataat cggtcctttt
1141 tctcagttga gagtggaacc aagatgtcag gcttacacat ttcaggagga cagtcagtcc
1201 ttgaacccat aaaatccgtc aaccaatcca ttaaccaaac agttagccag acaatgagtc
1261 aatctctgat tcctccatct atgaaccagc aacctttttc gtcggaatta atttcatctg
1321 taagccagca agagcggatc ccacatgaac ctgtgattaa ttcatctaac gtacatgttg
1381 gatcaagagg aagtaaaaag aattaccagt cacaggctga cattcccatt cggtctccct
1441 ttggtattgt gaaagcatcc tggctaccaa agttttcaca tgctgatgcc cagaagatga
1501 agagacttcc aactccttct atgatgaatg attattatgc agcatctcca agaatatttc
1561 cacatttgtg ttctctgtgt aacgtagaat gtagtcattt gaaggattgg attcagcatc
1621 aaaatacatc tactcatatt gagagctgtc gacagttacg tcaacagtat cctgattgga
1681 atcctgagat cctcccatcg agaagaaatg agggcaatag aaaagaaaat gaaactccac
1741 gaagacgttc tcattccccc agtcctaggc gttctagaag atcaagctca agtcacagat
1801 tccgtcggtc tcgaagccca atgcattaca tgtataggcc gagaagtcga agtccaagaa
1861 tttgccatcg tttcatttct agatacagat ccagatccag atcccgttca ccatatcgaa
1921 ttagaaatcc atttagaggt agtccaaaat gctttcgatc agttagccct gagaggatgt
1981 caaggagatc agtgagatca tcagatagaa aaaaagcatt agaagatgta gtacaacgat
2041 ctgggcatgg gacagaattt aataaacaga agcatcttga agctgctgat aagggacatt
2101 caccagcaca aaagcctaaa actagcagtg gaacaaaacc atcagttaaa cctacaagcg
2161 ctacaaagag tgattcaaat ctaggaggac attctattcg ttgtaaatca aagaatcttg
2221 aagatgacac tttgtcagaa tgtaaacagg tgtctgataa agctgtttct ctccagcgaa
2281 agcttcggaa agaacagtca ttgcattatg gttcggttct tcttataact gaattaccag
2341 aggatggttg tactgaagaa gatgtgagaa aattatttca accatttggg aaagtgaatg
2401 atgtcctaat tgttccatat agaaaagagg cttacctaga aatggaattt aaagaggcaa
2461 ttactgcaat tatgaagtac attgaaacaa cacctcttac gataaaagga aaaagtgtga
2521 aaatatgtgt tccaggaaag aaaaaagcac agaacaaaga ggtgaagaaa aagactttag
2581 agtcaaagaa agtatctgca tctaccttaa aaagagatgc agatgcttca aaagctgttg
2641 aaattgttac ttcaacttct gctgccaaaa ctggacaagc caaggcatct gtagccaaag
2701 taaacaaatc tacagggaaa tcagcaagtt ctgtaaaatc tgtggtaacg gtagctgtta
2761 aaggtaataa agcttcaatc aaaacagcaa aatctggtgg aaagaagtct ctagaagcca
2821 aaaagactgg gaatgtcaaa aacaaagact ctaacaaacc tgtgactata ccagaaaact
2881 ctgaaataaa gaccagtatt gaagtcaaag ccactgaaaa ctgtgctaaa gaagctattt
2941 ctgatgctgc tttggaggcc acagagaatg aaccacttaa caaggaaaca gaagaaatgt
3001 gtgtgatgct tgtctctaat ttgcctaata aaggatattc tgtagaagaa gtttatgact
3061 tagcaaaacc atttggtggt ttaaaggata tcttgatttt atcatctcat aaaaaggcat
3121 atatagaaat aaatagaaaa gctgctgagt ctatggtaaa attttatacc tgcttcccag
3181 tattgatgga tggaaatcaa ctctcaataa gtatggctcc tgaaaacatg aatataaaag
3241 atgaggaagc tatatttata accttggtaa aagaaaatga cccagaggca aacatagata
3301 caatctatga tcgatttgta catcttgata atttaccgga agatggactt cagtgtgtac
3361 tttgtgttgg acttcagttt ggaaaagtgg atcaccatgt attcataagt aatagaaata
3421 aggcaattct tcagttagat agtcctgaat ctgctcagtc aatgtatagc tttctgaaac
3481 aaaatccaca aaatattggt gaccatatgt tgacctgctc attatctcca aagatagact
3541 taccagaggt gcaaattgag catgacccag aattagaaaa agaaagccct ggcttgaaaa
3601 acagtccaat tgatgaaagt gaggtgcaaa cagcaactga tagtccctct gttaaaccta
3661 atgagcttga agaagaaagt actcccagca ttcaaacaga aactttggta cagcaggaag
3721 agccttgtga ggaagaagct gaaaaagcaa catgtgattc tgactttgct gttgaaactt
3781 tggagcttga aactcaagga gaggaggtca aagaagaaat tcctcttgta gcatccgctt
3841 cagtcagtat tgaacaattc actgaaaatg ccgaggagtg tgctttaaat cagcagatgt
3901 ttaacagtga cttggagaag aaaggggcag aaattattaa ccctaaaaca gcattgttac
3961 catctgacag tgtgtttgca gaagaaagga acctcaaagg aattctagaa gaatctccat
4021 ctgaagcaga agatttcatt tctggaatta cacagactat ggtagaagct gtagctgaag
4081 tagaaaaaaa tgaaactgtt tcggaaatat tgccatcaac ttgtattgtg acgttagtac
4141 caggaattcc cactggggat gagaagacag tggacaaaaa gaatatttct gaaaaaaaag
4201 gtaacatgga tgaaaaggag gagaaggaat ttaatactaa ggaaaccaga atggatcttc
4261 aaataggaac agagaaggct gaaaagaatg aaggtaggat ggatgcagaa aaggtggaaa
4321 agatggcagc aatgaaagaa aagcctgcag aaaacacttt attcaaggca tacccaaata
4381 aaggagtggg tcaggctaat aagcctgatg aaactagtaa aactagtatt ctggctgtat
4441 cagatgtatc tagcagtaaa ccaagcatca aggctgttat agtctcttct cctaaggcaa
4501 aagctacagt ttcaaaaact gaaaatcaga aaagttttcc aaaatctgtg cccagagatc
4561 aaataaatgc tgaaaagaaa ctttcagcca aggaatttgg tctgcttaaa cccacaagtg
4621 ccaggtcagg cttggcagaa agcagcagta aattcaaacc tactcagagc agtcttacca
4681 gaggaggcag tggaaggatc tcagccctgc aaggcaagct ttctaaactg gattacagag
4741 atataacaaa acaatctcag gaaacagagg ctagaccttc catcatgaaa cgggatgaca
4801 gcaacaataa gactttggct gagcaaaaca ctaagaatcc taaaagcact actggtagaa
4861 gttccaaatc taaagaggag ccattatttc catttaattt ggatgaattt gttactgtgg
4921 atgaggttat agaagaagtg aatccttctc aggccaagca gaatccacta aagggaaaaa
4981 ggaaagaaac tctcaaaaat gttcctttct ctgaacttaa ctt
//