LOCUS AK289057 2596 bp mRNA linear PLN 16-FEB-2008 DEFINITION Oryza sativa Japonica Group cDNA, clone: J090093G03, full insert sequence. ACCESSION AK289057 VERSION AK289057.1 KEYWORDS FLI_CDNA; CAP trapper. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2596) AUTHORS Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K., Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T. TITLE Direct Submission JOURNAL Submitted (04-SEP-2007) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Division of Genome and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Kikuchi,S. TITLE Oryza sativa full length cDNA JOURNAL Published Only in Database(2007) COMMENT This clone is one of the 1.9K full-length cDNA clones from japonica rice. URL:http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y. NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2596 /clone="J090093G03" /cultivar="Nipponbare" /db_xref="taxon:39947" /dev_stage="1 day after pollination" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" /tissue_type="pistil" BASE COUNT 696 a 546 c 633 g 721 t ORIGIN 1 ggtcctcctc cgcggcgagg cggcccttcc gctccccctc gcgtggcgcg gccggccggt 61 gagcaccgcc gctcgcgacg acgagctcgc cgggaagagc gcctatgagg tgctcggggt 121 cggggagacc agctcctccg ccgagatcaa ggcctccttc caccgcctcg ccaaggagac 181 ccaccccgac gtcgccgccg ccgccgggtc cagccgcttc cttcagatcc tcgctgccta 241 cgagatccta tcggattcac agagaagggc tcactatgat atctacctgc gatcgcagaa 301 gcgagttttg cagaagcatc ctaggccatc tcatcatgta tatccaaatc caagtggttc 361 aggcattgta gtaacaagag aaagtaatgt tgttgagtgg ctaaaatggt ataggctcac 421 tattgatgac atagttacaa agaagagggt tgcgacaggg tcaggttact ttgataagct 481 tgaaagtgaa ctgtacacag caatccatgc tgcatactat ggtccggatg ttcggtctgt 541 ggatctcctt cctgattgct ttgaagctga ggagagagtt caacagctgc cagatgcttt 601 tcaggagaag cagacgctac ctggttttaa aacttacggg attagtcagc atgtttcaac 661 aaacttggag aaaggcacag tacacgccag tcctgtatat attcacaaga gagagattga 721 caagaatgat ggtcctcatt cagatgccta caaggatatt gaattgtgga tctgtgggaa 781 attagtagct actgcaacga ggagccctaa gtgcaattgt attgataaat cagatgtgga 841 agatcacata catgtatttc ttgtcccaaa tgaagtggct tcatctgatt ttacacaaga 901 gcttcctatc ctgggaacta ttactggctt ggccaccact ggggaggaag gatcttgctg 961 tgtctatgat agccgtggga taaagacaca tctaattgtc aagcacagaa cattaatggt 1021 caaacacatg cactggtatc aagttggaga tgaaatttct ccatgtgagt gtcgatgcag 1081 tagggctcgg ttgccaccta gtagatattg gctttttgag cctcgttgtt atatgcatga 1141 cactggtggc tggtacattg agacctttgg aagggacaag aaagggagga aaattctatc 1201 accaagacaa tgggatggtt ccaatgaaca ctctgaaagg aggttgcatc cagcaatgta 1261 tctggcagct ctagcttaca gatctttgga tattgaggat gctcaacgaa agaaatggag 1321 cattacgacc ttcctggaac tgcagtcatc tcatatctgt caattgtgca aaaaaatctt 1381 caatggggga aaggaaagtt catgagaaca ccatgagaaa tgcacagcag tttcaagaat 1441 ttgatctttg acaactctga tactatgatg ccatgccttg ttcacccgtt gatcatatcc 1501 ttgagatttt ggtgtggcta tgtagcatca tggcactgca ctggaagata tatagtgcac 1561 ctctagaata agcaaaatta tctgaggctg ttcattgtgc tgattgttgg atgtggcacc 1621 cctggtcaat agcttttttg ctgtgctgat gtcagaattt ccacaccatt tgctatgaaa 1681 ggacagacat tatggcttca gccatggcca gttaacttga agtctgtctt atgaccaacg 1741 ggtgggaata tgggagaaag ttaataatta cttggcttct cgactggagt ttaatctact 1801 tggcatattg attttatatt aggcgagcac cctctaaatt tggtgaaggt gagagatgaa 1861 gcagccaccg agcttagcgt gaacattcta agaaaagggg aaagcactat gaaaaagcac 1921 cagcaagcag caacagctct gcatggagag ggatattgta ttttcttagc ctcttaggtg 1981 tcgactgagt tgcgcatgct attgtgggca agttgtttat gtttgagaca atgaattttg 2041 cttctatagt tccacctgat ggaagactac actttgatct cggcacacta actctctgca 2101 gttgaccttc atacggaaac tttggctctt cggtaaaact tagttcaaga agataataga 2161 tctgttagtg tctggtttaa tcattgtctg ggaggtacca actaggccat tattccccag 2221 gaaccaatct agtcaaatac ttcatatgct tggaattttc tgaattcact gaccaagaga 2281 cctaaacatt ttctggagaa cacatgctga tgctgtggta cactaagtta attcaagttc 2341 aaagtacttg gtctagtttg atgcttcgtg attgcatcct gatgtttata catcactggt 2401 gaagaaagtg ccaaagtgtc tcatgttcac gggttggttt cgagtagtac aggtttgttg 2461 tgttcaggac cccaggagtt gcttttcacc atatggatgc aatcatgtac atatgccttt 2521 tctttttgcc acaataatcg ttgtaagctg tggtttcagg cccgttcttt gaaattgaga 2581 tgaccagcaa tagtgc //