LOCUS AK242733 2029 bp mRNA linear PLN 04-DEC-2008
DEFINITION Oryza sativa Japonica Group cDNA, clone: J090047O22, full insert
sequence.
ACCESSION AK242733
VERSION AK242733.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 2029)
AUTHORS Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T.,
Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A.,
Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N.,
Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y.,
Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y.,
Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H.,
Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T.,
Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y.,
Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T.,
Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T.,
Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M.,
Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R.,
Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M.,
Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R.,
Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D.,
Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K.,
Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K.,
Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and
Bito,T.
TITLE Direct Submission
JOURNAL Submitted (10-OCT-2006) to the DDBJ/EMBL/GenBank databases.
Contact:Shoshi Kikuchi
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Kikuchi,S.
TITLE Oryza sativa full length cDNA
JOURNAL Published Only in Database(2006)
COMMENT This clone is one of the 2.6K full-length cDNA clones from
japonica rice.
URL:http://cdna01.dna.affrc.go.jp/cDNA/
NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.,
Yamamoto,M. and Nakahama,Y.
NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H.,
Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T.
FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
Yoshimura,A., Matsubara,K. and Murakami,K.
Genome Exploration Research Group in Riken Genomic Sciences Center
and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
Yasunishi,A. and Hayashizaki,Y.
FEATURES Location/Qualifiers
source 1..2029
/clone="J090047O22"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/dev_stage="after pollination"
/mol_type="mRNA"
/organism="Oryza sativa Japonica Group"
/tissue_type="embryo"
CDS 465..1784
/db_xref="Osa1:LOC_Os12g02200"
/note="(Rice Genome Annotation Project) CBL-interacting
serine/threonine-protein kinase 15, putative, expressed"
/note="mapping to R12-TIGRv4S1-000040R (Chr.12: short
arm=678078, long arm=681143, direction=reverse) for TIGR
Pseudomol ver4"
/protein_id="BAH01328.1"
/translation="MESRGKILMERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMD
KQQVLKVGLSEQIRREITTMRLVAHKNIVQLHEVMATRNKIYFVMEYVKGGELFEKVA
KRGKLTEVVAHKYFQQLISAVDYCHSRGVYHRDLKPENLLLDENENLKVSDFGLSALS
ESKRQDGLLHTTCGTPAYVAPEVISKIGYDGAKSDIWSCGVILFVLVAGYLPFQGPNL
MEMYRKIQHGEFRCPGWFSRKLQKLLYKIMDPNPSTRISIQKIKESTWFRKGPEENRI
LKERTLNENTTKNVALVLGVRRKKNAHEDVKPMSVTNLNAFEIISFSKGFDLSGMFIV
KEWRNEARFTSDKSASTIISKLEDVAKALNLRVRKKDNGVVKMQGRKEGRNGVLQFDI
EIFEVTTSYHIIEMKQTSGDSLEYRQLLEEGIRPALKDIVLAWHGDE"
BASE COUNT 599 a 365 c 510 g 555 t
ORIGIN
1 ggcatccact ccacatacta ccactcaaaa actctctctc tctacccaaa caggttttga
61 gaaagaagtg gaggacagat ccaaaaagtt caccttttga ttatccaaac aagtttggag
121 tttgttacct gaatctcctc ttcttcctgt caccggaagg gaaattgata aaaaaaaagc
181 agtgaaagcc tcaaggaatg ctgaaagatg tgcttgcata gaagaaattt tccgtgtgag
241 ataaagcaga ttgctggttc actagtgcta ctgatctgct caagtcttga tgtgagtgat
301 caactttcct gcactaattc tacaccattt agactccgaa acgacgatga tataagaatg
361 ttgttctcca ttcatgatca tgaccttggg gaggatggct aaagaattgc agtccatctg
421 attggtggtc aaaacatagt gctgagattt atatctttgt gggcatggag agtagaggga
481 agatactaat ggagaggtat gagttgggca gattgttggg gaaaggaaca tttggcaagg
541 tgcactatgc aaggaatctg gagtcaaacc agagtgtggc cataaagatg atggacaaac
601 agcaggtgtt gaaggtcggg ctttcggagc agatcagacg tgagatcaca accatgcggt
661 tggtggctca taagaacatt gttcagcttc atgaggtcat ggcaacacgg aacaagatct
721 actttgtgat ggagtatgtg aaaggtggtg agctatttga aaaggttgca aagcgtggaa
781 agcttacaga ggttgttgca cataagtact tccagcaact cattagtgca gtggattact
841 gccacagtcg aggtgtgtat caccgggact tgaagcctga aaacctgctg ttggatgaga
901 atgagaacct gaaagtctca gactttggac tgagtgcgct ttcagagtcg aagaggcaag
961 atggcttact ccataccacc tgtggaacac ctgcatatgt agctccagag gtgatcagca
1021 agataggata tgatggtgca aagtcagata tttggtcttg tggtgttatc ctgtttgttc
1081 ttgttgctgg ttaccttcct ttccagggcc caaacttgat ggaaatgtat cggaagatac
1141 aacatggtga attcaggtgc cccggttggt tttcacgcaa acttcagaag ttgttgtaca
1201 agatcatgga ccccaaccca agcacaagga tttcaatcca gaagataaag gagtctacct
1261 ggttccggaa aggtcctgag gagaatcgta ttttgaagga aagaactttg aatgaaaaca
1321 ccaccaaaaa cgttgctctg gtgcttggtg tgagacgcaa gaaaaatgct catgaagatg
1381 tgaagcccat gtcagtgaca aacttaaatg cctttgaaat tatctctttc tccaaggggt
1441 ttgatctctc tggcatgttc attgtaaagg aatggagaaa tgaggcaagg ttcacttcag
1501 ataaatctgc ctcaaccata atctcaaagc tagaagatgt agcaaaggcg ctaaatctca
1561 gggtaaggaa gaaagacaat ggtgtagtga agatgcaagg gaggaaggag ggaaggaatg
1621 gtgttcttca gtttgacata gagatatttg aggttaccac ttcctatcat atcatcgaga
1681 tgaaacaaac aagtggcgat tcattggagt accgacagct actggaggag ggcatccggc
1741 cagctctgaa ggacattgtc ttggcctggc atggagatga atagcagcag tcgcaagagt
1801 agattttgat gtctcaagca tttagtttcc gctcctcaaa ttcattaggt tttagctcaa
1861 atgaatttat ttgtcttgcc tatgttcttt ttagcatcta tgtttttgta tctggagagt
1921 tcatgttgag gcaatctatg cacaatttag atggagtctg tcgagagtaa ttttatgaga
1981 agttgagctg caatataaaa gttggctttg agcctttcaa gctttcttc
//