LOCUS AK161567 1260 bp mRNA linear HTC 06-OCT-2010 DEFINITION Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330416G15 product:unclassifiable, full insert sequence. ACCESSION AK161567 VERSION AK161567.1 KEYWORDS HTC_FLI; HTC; CAP trapper. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1260) AUTHORS Arakawa,T., Carninci,P., Fukuda,S., Hashizume,W., Hayashida,K., Hori,F., Iida,J., Imamura,K., Imotani,K., Itoh,M., Kanagawa,S., Kawai,J., Kojima,M., Konno,H., Murata,M., Nakamura,M., Ninomiya,N., Nishiyori,H., Nomura,K., Ohno,M., Sakazume,N., Sano,H., Sasaki,D., Shibata,K., Shiraki,T., Tagami,M., Tagami,Y., Waki,K., Watahiki,A., Muramatsu,M. and Hayashizaki,Y. TITLE Direct Submission JOURNAL Submitted (14-APR-2004) to the DDBJ/EMBL/GenBank databases. Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL :http://www.osc.riken.jp/ REFERENCE 2 AUTHORS CONSRTM The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) TITLE The Transcriptional Landscape of the Mammalian Genome JOURNAL Science 309, 1559-1563 (2005) REFERENCE 3 AUTHORS CONSRTM RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium TITLE Antisense Transcription in the Mammalian Transcriptome JOURNAL Science 309, 1564-1566 (2005) REFERENCE 4 AUTHORS CONSRTM The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team TITLE Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs JOURNAL Nature 420, 563-573 (2002) REFERENCE 5 AUTHORS CONSRTM The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium TITLE Functional annotation of a full-length mouse cDNA collection JOURNAL Nature 409, 685-690 (2001) REFERENCE 6 AUTHORS Carninci,P. and Hayashizaki,Y. TITLE High-efficiency full-length cDNA cloning JOURNAL Meth. Enzymol. 303, 19-44 (1999) REFERENCE 7 AUTHORS Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K., Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y. TITLE Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes JOURNAL Genome Res. 10, 1617-1630 (2000) REFERENCE 8 AUTHORS Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N., Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T., Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M., Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S., Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y., Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K., Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M., Inoue,Y., Kira,A. and Hayashizaki,Y. TITLE RIKEN integrated sequence analysis (RISA) system-384-format sequencing pipeline with 384 multicapillary sequencer JOURNAL Genome Res. 10, 1757-1771 (2000) COMMENT cDNA library was prepared and sequenced in Mouse Genome Encyclopedia Project of Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in RIKEN. Division of Experimental Animal Research in Riken contributed to prepare mouse tissues. Please visit our web site for further details. URL:http://www.osc.riken.jp/ URL:http://fantom.gsc.riken.jp/ clone information is available at: http://fantom.gsc.riken.jp/3/db/annotate/ main.cgi?masterid=5330416G15 FEATURES Location/Qualifiers source 1..1260 /clone="5330416G15" /clone_lib="RIKEN full-length enriched mouse cDNA library" /db_xref="FANTOM_DB:5330416G15" /db_xref="MGI:3535019" /db_xref="taxon:10090" /dev_stage="adult" /mol_type="mRNA" /organism="Mus musculus" /sex="male" /strain="C57BL/6J" /tissue_type="pituitary gland" misc_feature 1..1260 /note="putative" /note="unclassifiable" BASE COUNT 355 a 297 c 325 g 283 t ORIGIN 1 tcagagctgg gtgtagcttc ctacctgggc actcctgtct ggccttgcca cattcccagc 61 agaatgtgca cagagctgcg ctgtagggtg gggaccagcg gggtcaggcc actggcaggg 121 ccccacgatc tctcagttga tattaattgt cagcttgaca acatctggag tcacctgtaa 181 gtctccggcc acgcctctga gagggttagt gcagttcagt taactgaggt gagacagttt 241 aaaaacaggt tgcaccattc ctgggcgtgg cccttgcact gaagagaggg gaaagcaggc 301 agacatgcgt ttgttcagtg tcctctgctt cttggctgtg gatgtgatgt cactagctgc 361 tgtaagcgcc tgttgccttt agtccccagc atgatgactg cactgggaac tgtgagccta 421 atagtcctgt ctcccttaaa tcgcttttgt cagggtattt aatcccagca agggggaaaa 481 aaataataca gtgtttactg actcggtatg ccccactgtg gcgatcagag cccaccagag 541 agagagaaaa ttgttgaaag cagtgtggct gggaggtggt ggtgcacctc tttaattcca 601 gcacttggga agcagagaca aacagatcta gatctctgtg agatcaaggc cagcccggtc 661 tgcatagtaa actccgacac aaccaggaat acacagagaa accctgtctg gaaaaaaagc 721 aaaaaaattt taaaaattaa aaaagataca tagtatggca gaggtgttgg ctcacacctt 781 tagaggcaaa tggagcgcct gagttcaaag ccagcctggt ctacaggaca gtcggagcta 841 cacaaaccat gacttgaaaa aaaacaagca aacccctctc ccaaaaataa aatatataca 901 atgtggacct ggagagagag ttcagtggtc aagagcactg gctgctcttc caaagaacct 961 tggttcaatt cccagcaccc acatgaatgc tcacagtctt ttaatgccta ttccagaggc 1021 tctggtgcct tctactggcc tctgcaggta ctgcatgcac atggtgccca ggcatacatg 1081 caggggaaat aagtctttga aaaaagacag agacagagac agtgtgatga gcatggtgac 1141 acacaccact aaagccagca ctcaggagtc agaggcaggc agatctctga gttcaaggcc 1201 agcctgatcc acaaggtgag ttccaggcta gccaggacta tataatgaga ccttgtatgg //