LOCUS AK124570 4470 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ42579 fis, clone BRACE3008384, highly similar
to Rhomboid-related protein 4 (EC 3.4.21.105).
ACCESSION AK124570
VERSION AK124570.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4470)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..4470
/clone="BRACE3008384"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000044443"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 123..1043
/codon_start=1
/note="highly similar to Rhomboid-related protein 4 (EC
3.4.21.105)"
/protein_id="BAG54052.1"
/translation="MSNKRSNSFRQAILQGNRRLSSKALLEEKGLSLSQRLIRHVAYE
TLPREIDRKWYYDSYTCCPPPWFMITVTLLEVAFFLYNGVSLGQFVLQVTHPRYLKNS
LVYHPQLRAQVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGV
VAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALICMS
MEFGRAVWLRFHPSAYPPCPHPSFVAHLGGVAVGITLGVVVLRNYEQRLQDQSLWWIF
VAMYTVFVLFAVFWNIFAYTLLDLKLPPPP"
BASE COUNT 909 a 1191 c 1285 g 1085 t
ORIGIN
1 atgtcagaaa catccgagga ctacagagac cttggtgata agtgtgtctt tctttctctc
61 ctcttcttcc tctcctgcat ggcctccctc tctgccagca ctggaaagtc ctgtttgatc
121 agatgagcaa caagcgttcc aacagcttcc gccaagccat cctgcagggc aaccgcaggc
181 taagcagcaa ggccctgctg gaggagaagg ggctgagcct ctcgcagcga cttatccgcc
241 atgtggccta tgagaccctg ccccgggaaa ttgaccgcaa gtggtactat gacagctaca
301 cctgctgccc cccaccctgg ttcatgatca cagtcacgct gctggaggtt gcctttttcc
361 tctacaatgg ggtgtcacta ggtcaatttg tactgcaggt aactcatcca cgttacttga
421 agaactccct ggtttaccac ccacagctgc gagcacaggt ttggcgctac ctgacataca
481 tcttcatgca tgcagggata gaacacctgg gactcaatgt ggtgctgcag ctgctggtgg
541 gggtgcccct ggagatggtg catggagcca cccgaattgg gcttgtctac gtggccggtg
601 ttgtggcagg gtccttggca gtgtctgtgg ctgacatgac cgctccagtc gtgggctctt
661 ctggaggggt gtatgctctc gtctctgccc atctggccaa cattgtcatg aactggtcag
721 gcatgaagtg ccagttcaag ctgctgcgga tggctgtggc ccttatctgt atgagcatgg
781 agtttgggcg ggccgtgtgg ctccgcttcc acccgtcggc ctatcccccg tgccctcacc
841 caagctttgt ggcgcacttg ggtggcgtgg ccgtgggcat caccctgggc gtggtggtcc
901 tgaggaacta cgagcagagg ctccaggacc agtcactgtg gtggattttt gtggccatgt
961 acaccgtctt cgtgctgttc gctgtcttct ggaacatctt tgcctacacc ctgctggact
1021 taaagctgcc gcctcccccc tgagggctgg aggcccaagg tcggggaggg gagggaaaag
1081 cagcacccac agggagcgcc tgcgaggttt cttctcatca ccagctcagc taggccgggc
1141 agacaaggac agaagactct gggccactgt aatgtttgtg tttagatttg gacacacagt
1201 ggagaccctt ttctgaaagg catctggcgg aggagttgat gtggctgctg tcgtttttct
1261 cggctgctct gatgacatcg ggccagggtg aaggtctggg gtggggtgtg agagtggccc
1321 tccctcacct gggctgggct tcttccatgg ggccaggggg tgccccctca ctgctgcgga
1381 ttgagcagca gcttcttcct cctcctctac cctcagagac cctaagagac atgggaaggc
1441 tcgaaggttg ttgcgtccag gcatggcccc tctctagctc agaaataatt gcaggccatg
1501 tggtgtctcc ttgacacctg ctgtgtctgg ggctccagta agaagagggc ctactggaca
1561 tgtcagctgt gacctggctg aaaccagggt gccctcctgg gctggttggt gtgcaccggg
1621 gcatgatctg ttgtgcctgg gttgggcaga gcagggagcc tgtaggctct aggacccctc
1681 ttgtgctggg ggtacccagt gagagggacc catgcagggg gaataaactt cattccaagt
1741 tccaccctgg agaagacaga cccaggacca gcttcagact tctccctccc tttcttccag
1801 gatattggca tctcacacgg gtgccccagc ctccatgccc agccttgttt tagggtcttt
1861 ttctttcctt ttgctgccct gacactactt tgtgcctctc tttggttatg gagacagtgt
1921 tttgaaacat tcatgcgtgt gtgtgtgtgt gtgcgtatat gtgtgtatgt gatgggaaag
1981 gtaactgggg cacgacagcg cctgcagaga aggcatggag gatgcagggg gcccatgtgg
2041 gcatccgtga gaggtggcag accgtggtgt gctgtggttg ctgaatgtcc ttgctttgac
2101 aaagcctgcc cccttccttc ccatctcctg tcccttccac acctgcccct gagcatcact
2161 gaccggtggc agaatggccc tgctggaggg agagctcaag ccctccaagg atccctggat
2221 gctgaggttt gccaggttca gctcttgttt ccgtctgaga tggccttcat atccaaaaag
2281 gttccatcct atctccctta ggagagaaag agctttgggg gcgcaagaga ggctggggta
2341 ggaatgttga ggccatgtgt ccatttaagt tagggggaca ggaggctaca ggaagaggaa
2401 ttccagttta gttggaaaac tttgcctcag gagaattgtt gggtgcatgg atgaacctca
2461 gagggagggc agccagtagc ctcggaggct tggatgcggg agagaacatg gtggttatca
2521 aatccacccc accccattac acaggtgaga aaacaagatg gagggaatga ccctcctaac
2581 aggagctggt gcaggccccg aatggagggc atgaggatga cctttgacaa aagatgacac
2641 tccctttatc gtgctcttgg aattctcaac cactgacagc ccagaagaac aaagaacgcc
2701 aggcctggga ggaggcaggg gggctgggcg tgtccagaaa caggggcagg agtgtgggaa
2761 cggtcttcct ccagcctggt gcccatcctg gcccttgagt gtagcagggt ccagggtcag
2821 tcaggccagg catttggggt cttgggccac agtggcttcc catcctggtg actacatgta
2881 aatgggctca ctcactcact ggcaggcgag gcccagccat accgcatctt ggcccactgc
2941 taaatagatt gccctggcct catccacata tgtagttccc taggtcctgc tcccctgcac
3001 cagtgccatg ctgagggccg cagcctgtgg cactgtgggc ccacgccttt ggcggtgttg
3061 cgtcagcctg gggcgtcttg tgtgtgccct gcccaccgtt ctctgcccta gtgatagaaa
3121 gatgtagatg gaagtcagtg cctcagagga ggaggctctg aggctgtgga gctgggctca
3181 gggaagacca ggggaggatg cagatggagt caggacattg ctgcctctgc ctgggctgca
3241 gccgcactaa gctgagcgat gaggtccttt cctggaggga tggagaatcc cctccagatt
3301 cctgtcctgg cccctgggga ttctgtggtg tgggtggaat gagcagagtg ccacctctgt
3361 ctggtatgac ctggagaggg ggcttcctct cttaggggtg agaaagcatt gaactagaag
3421 attctagaaa tccctcatag aagcactcag ctccctcggg gactcccagg gaagcttgtt
3481 actgagaagg acagtggagg cggaatcgtg tctcccacca tgttaagtgt gtcctctgct
3541 gccaaggacc ctcgtctaca ccttagacca ccagccccag ctgttctctg tcagcacacc
3601 cacctccatc ccctctccca accatgactt ccaagcgggg ccacagggtg gggtcatagg
3661 gtcacttcac ctgacccagg cctctcccca ggtcaggagg cagctgtctg gtcagagggg
3721 ttctctttgt ggcatctggc tttctcctca gcaggtccca ccaccctctc agcagcactt
3781 ccccatggcc aaggctggcc gtgtcctctg tgcctctttc cttgtctgag gtggctgcca
3841 gcccaggggg tggtgtgtaa atcttcaggc tggtggaggt aggttggcct tttatccaca
3901 ggatacagaa actgaaagct ggggaatccc caaacagcag ccatagactc actggctctc
3961 attaaacggg agaggaatca cagaaactgg ggaagggaaa acaaaccttc aaaggagaaa
4021 tttcgcttta atgacaccat tcatcattcg ttttttaatt aggaaaagct ccctaatgag
4081 gctcttttgc cagctaatag gactctcgat ttccatgaga accattcttg cccagaggat
4141 taggggagct gttgctcacc acaccaggat cttcccccag cgtccaattt aatttgcaaa
4201 tacgtaatgc agattccctg ggtgccgtga aagcctttcc tggcatcatt catgttgctc
4261 cccgtgctgg ctggaaagca cggttctcct ctgccttaaa aacagtgccc aacagtgaac
4321 tgcccctccg aggacttgag taagtggaaa aaacaaaaca cagactgcaa tgtttgtttc
4381 taagtatttt tgtattgtgt acattctgta tatttttgtt gtaacatatt atttgagcac
4441 agattccatt aaatattttt tttctttttc
//