LOCUS       AK121938                1441 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033107C14, full insert
            sequence.
ACCESSION   AK121938
VERSION     AK121938.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1441)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Collection, mapping, and annotation of 28K full-length cDNA clones
            from japonica rice
  JOURNAL   Unpublished (2003)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1441
                     /clone="J033107C14"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             150..1112
                     /db_xref="Osa1:LOC_Os07g37010"
                     /db_xref="RAP-DB:Os07g0556000"
                     /note="(RAP Annotation release2) Cyclin-like domain
                     containing protein"
                     /note="(Rice Genome Annotation Project) CYCD6, putative,
                     expressed"
                     /note="mapping to R07-TIGRv4S1-000665R (Chr.7: short
                     arm=22167828, long arm=22170028, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAH00726.1"
                     /translation="MDMATGAKEVVVVEAYEYEFDLENPFTSPADEPIASLLDAEGHH
                     SPSVSAAASAARREAAGFISKVRYDGELDVHPRVAYLALNYVDRYLSKRQLACERNPW
                     APRLLAISCLTLAAKMQRAAAISAADIQRGEEFMFDEAKIQRMEQMVLNALEWRTRSV
                     TPLAFLGFFLSACFPQPRHPALLDAIKARAVDLLLRVQPEVKMAEFSPSVAAAAALLA
                     AAGEVAGAHLLGFEAGVAACPFVNSEKLRECGEVMAAACGVGPSWAAAATSAETPVTV
                     LGHHRSASSESERTTTVGSAANSADAKRRCMGPPRQWGVGGPDE"
BASE COUNT          231 a          466 c          453 g          291 t
ORIGIN      
        1 gagtagcact gcgtagcagc aatggtggct tcctcctcct cctcctcctc ctcctctccc
       61 tctcccccat aaagccacgc accacgcgcg gttggtttct tggcgtgttc ctgggccttc
      121 ctcgtactac gcggcggcgg gcggcggcca tggacatggc gacgggggcg aaggaggtgg
      181 tggtggtgga ggcgtacgag tacgagttcg acctcgagaa cccgttcacc agccccgccg
      241 acgagccgat cgccagcctc ctcgacgccg agggccacca ctcgccgtcc gtctccgccg
      301 ccgcctccgc cgcccgccgc gaggccgccg ggttcatctc caaggtgcgg tacgacggcg
      361 agctggacgt gcacccccgc gtcgcctacc tcgcgctcaa ctacgtagat cgctacctct
      421 ccaagcgcca attggcctgc gagcgcaacc catgggcgcc gcggctgctc gccatcagct
      481 gcctcaccct cgccgccaag atgcagcgcg ccgccgccat ctccgccgcc gacatccaga
      541 ggggcgagga gttcatgttc gacgaggcga aaatccagcg catggagcag atggtgctca
      601 acgcgctgga gtggcggacg cgctccgtca cgccgctcgc cttcctcggc ttctttctct
      661 ccgcgtgctt cccgcagccg cggcacccgg cgctgctcga cgccatcaag gcccgcgccg
      721 tcgacctcct cctccgcgtc cagccggagg tgaagatggc ggagttctcc ccctccgtgg
      781 cggccgccgc ggccctcctc gcggccgccg gagaggtcgc cggcgcccac ctcctcggct
      841 tcgaagctgg cgtcgccgct tgcccctttg taaatagcga gaagttgcgg gagtgcggcg
      901 aggtgatggc ggcggcctgc ggcgtcgggc ccagctgggc ggcggcggcg acgagcgccg
      961 agacgccggt gacggtgctc ggccaccacc ggagcgcgag ctccgagagc gagcgcacca
     1021 ccaccgtcgg atcggcggcc aacagcgccg atgcgaagag gcgctgcatg ggcccacctc
     1081 ggcagtgggg ggtaggcggc cctgatgagt gatgaggcaa cgtgagcgag agatagggtg
     1141 acgactcgga cgacagctgg aagagctgga aatttgctct tgccctgctc tttctttcat
     1201 tcacctttcc ttttctttcc gattcttttt tccctctatt ttaatctttt cgaggtaaag
     1261 caggaatgga gataattggt ggtggtagct gtcattttaa ttgctttttt tgctcgtctt
     1321 tttttaggct agttttgttt ttgttcagaa gtactggatg ttaagggcga tgaatatatt
     1381 gtggtgagag ggagaggggg ataatgtgat attgcggaaa ataaaaaaaa tgttgttgct
     1441 c
//