LOCUS AK121766 2482 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033092A16, full insert sequence. ACCESSION AK121766 VERSION AK121766.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2482) AUTHORS Kikuchi,S. TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Collection, mapping, and annotation of 28K full-length cDNA clones from japonica rice JOURNAL Unpublished (2003) REFERENCE 3 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 32K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2482 /clone="J033092A16" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2482 /db_xref="Osa1:LOC_Os05g03620" /db_xref="RAP-DB:Os05g0127300" /note="(RAP Annotation release2) Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein" /note="(Rice Genome Annotation Project) protein kinase, putative, expressed" /note="mapping to R05-TIGRv4S1-000087F (Chr.5: short arm=1525332, long arm=1528075, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 347 a 871 c 818 g 446 t ORIGIN 1 gaatccgcgc cttcctctca caagtctcct cttcttctac gtactcctct ccttcccccg 61 cgcagccgta cacgactccc gatgagatga cggccaccgc cgccgtcgtc gccgcccgcc 121 tcatccaatg accccgctcc tcctcctcct cctcctcccc cttctcctcc tcgccccggc 181 ctccgcctcc accgtcgcca tcgccgccgg ccccaccgcc tgcgccgtcg cggagggaaa 241 cctccaccgt ctactgcgcc tccgccacca actcgtcctc ctccgccgcc gtcgcgccgt 301 tcgtcagctt ctcccaggtg tccggcggcg ggggggcgtt cgtctgcggg ctgcaggtcg 361 gggggcgcgc gctcttctgc tggcccgccg cggcgccggg tcagctcagg cgggtgtaca 421 acggcccggg ccagctgtca cagctcgccg tcgggggcgg ccatgtcgcg gcgtacgacg 481 ccgcggcgcg ggtgatacgg tggtggcgtg gcggggaccg gttccctctc tggttcggcg 541 gtgggttcgc ctccctcgtc tccggcgacg acttcacctg cgccgtggag acgagcacct 601 ccgccgtccg gtgctggggc ccgcgcggcg gcgccgtgga ggcgggtttt ctcaacgcct 661 ccgtctccgc cctcgccgcg ggaggttccc gcgcgtgcgg ggtgaggagg aacgacggcg 721 gcgtgctctg ctccggcggt ggcgtgctcg cgccgcgcga ggacctgtac gtggacggcc 781 tggccgtcgg cgactcccac gcgtgcggcc tcctccggcc gaaccacacc gccgcgtgct 841 ggagcctcgg gggcgccacc accacgctct actacccggc ggtcggcacg gcgttcgagc 901 tcctcgtcgc cggcggtaac ctcacgtgcg gcctcgtgtc ggccaacttc agcctgctct 961 gctggtcgag ggatgggttg gtggcggcgg aggtgaacct gccgccgatc ctccccggcg 1021 tctgcgtctc cgacaacagc tcgtgcaaat gcggcccgct cccggactcc gggaggttct 1081 gcaaggtctc cggcggcgcc gccgcagctg tcggcagtgg cgcgccgagc ccgtacgggt 1141 cgccgaacgg gtcgctcggc cgcctgcggc ggcagctgtc gcgcgtgatg acgcggcagc 1201 ggagcgggcc gtcgtcgttc aaggaccccg ccgaggagtt caccttcgcg cagctcgcgg 1261 cggcgaccaa ggacttcgcg gcggaggcca agatcgggga ggggagcttc gggacggtgt 1321 accgcggcaa gctccccgac gggcgggagg tggccatcaa gcgcggcgag tcggggccgc 1381 gcgcgcgcaa gttccaggag aaggagacgg cgttccggtc ggagctggcc ttcctctcgc 1441 ggctccacca caagcacctc gtcggcttcg tcggctactg cgaggagagc gacgagcggc 1501 tgctggtcta cgagtacatg aagaacggcg cgctctacga ccacctccac cccaagccca 1561 acggctcgtc ctcgccgtcc ccgtcgccgg tggccacgtc gtggaagctg cgcatcaaga 1621 tcctgctcga cgcgtcgcgc ggcatcgact acctccactc gtacgccgtg ccgccgatca 1681 tccaccgcga catcaagtcg tcgaacatcc tgctcgacgg cagctgggtg gcgcgcgtgt 1741 cggacttcgg gctgtcgctg atggggccgg agacggagga ggtgaagcac ctgtcgatga 1801 aggccgccgg gacggtgggg tacatggacc cggagtacta cggcctccac cacctcaccg 1861 tcaagagcga cgtctacggc ttcggcgtcg tcatgctcga ggcgctcacc gggaagcgcg 1921 ccatcttcaa ggaggccgag ggcgggagcc ccgtcagcgt ggtggactac gcagtcccca 1981 gcatcgtcgc cggcgagctc agcaaggtgc tcgacgcccg cgcgccggag ccgagcgcgc 2041 acgaggccga ggccgtcgag ctggtcgcct acacggcggt gcactgcgtc cggctggagg 2101 ggaaggaccg gccggcgatg gcggacatcg tggccaacct cgagacggcg gtggcgctct 2161 gcgaggacag cgccaccggc ggcggcgccg ccggccatgg caacagctcg tccagcgcca 2221 gcctctccat cacgtccatg gagttgagta ggatggattg attgagatta gtagcttccc 2281 taattcaaat ccagagtttc aaattgtgat tagccccgga aggagatttt aaaatttgtt 2341 gcttcacttc attttttttt agaggagaac atcatttgtg tgattctctc acacattttg 2401 ttcatggtgg ctgtacatga ttttgtattg aactgatttc tcttttcata gatgagaaaa 2461 tttctctctt tttttttcta ct //