LOCUS       AK120733                3207 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023003D10, full insert
            sequence.
ACCESSION   AK120733
VERSION     AK120733.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 3207)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Collection, mapping, and annotation of 28K full-length cDNA clones
            from japonica rice
  JOURNAL   Unpublished (2003)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..3207
                     /clone="J023003D10"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..3207
                     /db_xref="Osa1:LOC_Os07g20510"
                     /db_xref="RAP-DB:Os07g0300200"
                     /note="(RAP Annotation release2) Protein
                     prenyltransferase domain containing protein"
                     /note="(Rice Genome Annotation Project) auxin Efflux
                     Carrier family protein"
                     /note="mapping to R07-TIGRv4S1-000428F (Chr.7: short
                     arm=11844118, long arm=11847324, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          797 a          742 c          794 g          874 t
ORIGIN      
        1 gacagaagat cccgttcccg tgctctgttg ccaattctcc cccaccacca tgctcctcgc
       61 cgcgcgcggc cgccgtcacc ccttcgccgc cgcgcgcctc cttccgatcc cgctttcctc
      121 cggcccctcc ttcgcctcct ccaccaccac cacgacctcc aatggcgcct gttcgtcctc
      181 cgccgcggac cccgacgccg tggccgccga ggtggccacc ctcctctccc gctgctccgg
      241 cgactggagg ctcgccgtct cctcctccga cctcccctcc cgcctctccc ccgccgccat
      301 ctcctccctc gtccgacgac gcccgtcccc ctcctccccg cgcctccacc ctaagctcct
      361 cctcgacttc ttctactggt ccagccccca gctcgcgccg tcggcccccg cccccgatgc
      421 cttcgcccac ctggccatgt ccctgtgcgc cggctcactc ttcaacctgg ccaacggcct
      481 cctcatcaag atgatccgcg cctacccgtc acctcccgtc gtcctcgcct ccatccatcg
      541 cgcgctatcg gattctggcc accgttcgcc ggcggtgctc gacgtcctcg tggataccta
      601 caagaagtct gggagggtgc aggacgccgc ggaggtcgtc ctgatgatga gagatcgggg
      661 catggctccc agcattcggt gctgcaacgc gctgttgaag gatctgctgc gcgcggacgc
      721 catggctctg ctttggaagg tgcgagagtt catggttggc gctgggattt ccccggatgt
      781 gtatacgtac tcgactctga tcgaagccta ctgcaaggtc cgggaatttg atactgccaa
      841 gaaggtgctt gtggaaatgc gtgagagggg gtgcggcctg aacaccgtaa cctacaatgt
      901 gctgattgct gggttatgca ggtctggggc tgtcgaagag gcgtttgggt tcaagaagga
      961 catggaggat tatggactag ttcctgacgg gtttacctat ggcgcactca ttaatggact
     1021 gtgcaagagc cgtaggtcaa atgaggcgaa ggcattgttg gacgagatgt cttgtgctga
     1081 gctaaagcct aatgtcgtag tttatgccaa tctgattgat gggtttatga gggagggcaa
     1141 tgcagatgag gcgtttaaga tgataaagga gatggttgct gctggtgtgc agccaaacaa
     1201 aattacctat gacaatcttg ttcggggact atgtaagatg gggcagatgg acagggcttc
     1261 tctacctttg aagcaaatgg tcagagatag ccataggcct gataccatca cgtacaatct
     1321 cattattgaa ggacatttcc gtcatcatag caaaaaggat gcttttcggc ttcttagtga
     1381 aatggagaat gctggtattt cccctaatgt atatacttat agcataatga ttcatgggct
     1441 atgccaaagt ggtgaaccag aaaaggcaag tgatctcctt gaggaaatga ctacaaaagg
     1501 attgaagcct aatgcatttg tttatgcgcc tcttatctca gggtactgta gagaaggtaa
     1561 tgtttcattg gcatgtgaaa tttttgataa gatgacaaag gtgaatgtac tccctgattt
     1621 gtactgctac aattctctta tatttggact atctaaggtg ggaagggtgg aggaatctac
     1681 aaagtacttt gctcagatgc aggagagagg attgctgcca aatgaattca catacagtgg
     1741 cctcattcat gggtatctaa agaatggtga tctagaaagt gctgaacagt tagtgcagcg
     1801 gatgcttgac actggactaa aaccaaatga tgttatctac attgatctcc tagaaagcta
     1861 ctttaagtca gatgatattg aaaaggtgtc ctctactttc aagtccatgt tagaccaggg
     1921 agttatgctt gacaaccgta tctatggaat cttgattcat aatctgtcca gttctggaaa
     1981 tatggaagca gcatttaggg ttctttcagg gattgagaag aatggatctg ttccggatgt
     2041 gcatgtgtac agctcgttga tatcaggtct ttgcaagaca gctgacaggg aaaaagcttt
     2101 tggtattctt gatgaaatgt ctaagaaggg agtagatcct aatattgtat gctataatgc
     2161 cctaattgat gggctgtgca agtctggtga tatttcttat gcccgcaatg tcttcaatag
     2221 catattagct aagggattag tgccaaactg tgtgacatac acaagtttga ttgatggaag
     2281 ctgcaaagtt ggtgacatca gcaatgcatt ctatctttat aatgaaatgc tagcaacagg
     2341 tataacacca gatgcttttg tctatagtgt acttaccact ggctgctcta gtgctggtga
     2401 ccttgagcag gcaatgtttc tgattgagga aatgtttctt aggggacatg caagtatttc
     2461 ttctttcaat aatttagttg atggtttctg caaacgtgga aagatgcagg aaactttgaa
     2521 gttgttgcat gtgataatgg gcaggggcct agtacctaat gccctgacta ttgaaaacat
     2581 catcagtgga cttagtgagg ctggaaaact cagtgaagtg cacacaattt ttgttgagtt
     2641 gcagcagaaa acttcagaaa gcgctgcccg ccacttttcc tcattgttta tggacatgat
     2701 aaatcaagga aaaattcctc ttgatgtggt tgatgacatg attcgagatc attgtaaaga
     2761 aggaaatctg gacaaggctt taatgctgcg agatgttatt gttgcgaaaa gtgcaccaat
     2821 gggctgctcg tcctatcttg ctatagtgga caatctatgc cggaagggaa aattaagtga
     2881 agcgttgaat ttgctgaaag aaatggacaa gagaggtatt tgtcccagtg agaatcaatg
     2941 cttgatacta ttaactaatc ttcatacatc tggatatatc caagaacaca atacggtact
     3001 tgataatatg ttgtgtcaca agtggttaca gaaggacagc aaattctgta attcagctgg
     3061 tgataatctg gaatctgtca atgcagaata aacatagagc agaatccttc ctataaaaga
     3121 aagtctgatt ctattattca tgttgcgaat gcatgtcgta gccttgtttt tgtttattga
     3181 tgaggaatta aacagattaa ttttttc
//