LOCUS AK110967 1553 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:002-174-B07, full insert sequence. ACCESSION AK110967 VERSION AK110967.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1553) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1553 /clone="002-174-B07" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1553 /db_xref="Osa1:LOC_Os11g16290" /note="(Rice Genome Annotation Project) NIN-like protein 2, putative, expressed" /note="mapping to R11-TIGRv4S1-000375R (Chr.11: short arm=8952976, long arm=8955376, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 372 a 378 c 399 g 404 t ORIGIN 1 attccctatt ccattccctt ttctcctcct cctcctcctc ctcaccgccg gcggcgagcg 61 gccggccggc gagcagagca gagcagagga gagagccgac ctccatctgg gctccaatcg 121 aagctgaagc gcctcgtcgt agtttgggca aaagaagttt tgattttttt tatttatttt 181 gggtgctgag gaagagtgta attatctgtg aggattgaga agatggatgg aggtgggacg 241 ccggatgggg atccggtgcc ggacatggac atgctcatgc tgtcatcagc gctcgatggc 301 ctcgacagct acaccgacct cgtcgtgggt tcatcggtag ccgacagcat cttctcagct 361 cttacctgtt tcccaccatc acaagaacga ttgctgcacg tctcgactcc tgtgggttct 421 aattctaggc aagatgattc tgatgtttcc atcactaagg agggtacaac aacaagaaga 481 ggtgattgcg ccgccggatt agcttcaggt gagccggtgg ccgcgggaat tggctctgtc 541 ccgaagccgt tcgacggcgt cacactgacg gagaggatgc tcagggcgct tgcgatgctc 601 aaagaggcgt cgggtggcga agcgatcctt gtgcaggtct ggatgcctgt gaggaatggg 661 gagcagcatg tgctgactac ctctgaccag ccgttcttgc tcgatcagaa gcttacggga 721 tacagggaag tctccaggca gttcacattc tcggctgaag aaggacccgg tctgttcccc 781 ggattgcccg gccgggtttt catgtccggc atgccagagt ggacgtcgaa tgtgatgtac 841 tatcatggct cggagtattt gagggttgat tatgctaggc gccacgaggt ccgtggatcc 901 cttgcgatgc cggttttcaa ctcaagtggt gggtcttgct gtgcagtgtt agaagtagta 961 atgacacgag agaaggataa cttttgctta gagatggtca atgtttcgaa tgctctgcag 1021 ggcacacatg acttgaacac acagcacaga aagaatgact aacatcagat ggacacctta 1081 caaacacaat ttcagtcaat gcctagggtc agtcgggaag acaagctgag tttcttgtcc 1141 tttatatcac ccacaaacac aagccacccc caatcatcca gaactagttg gaatttggaa 1201 accgggcaat ccatccaatc ccaaatatcc ccaattgagg taggtgatct agcatgatgt 1261 atgctcaact gaccatgaac tttgctagca cacattttca aaatgtttct caggacactc 1321 accgaacttg caattctggg aactcttcta acatgagtta tctttagtca aaatatttct 1381 gcacagcagc cacgagtttt ttttttcctc taaggctggt tgcttagtct cccagcagat 1441 gtaaagaata aagacggcca tatacatagc ttttgttaat ctccttttgt ctttctagag 1501 catcagtaga tgcatatgta tccacatctt gctttaagta gccgtaattt cac //