LOCUS AK106429 2064 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:002-103-C01, full insert sequence. ACCESSION AK106429 VERSION AK106429.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2064) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2064 /clone="002-103-C01" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2064 /db_xref="Osa1:LOC_Os05g03620" /note="(Rice Genome Annotation Project) protein kinase, putative, expressed" /note="mapping to R05-TIGRv4S1-000087F (Chr.5: short arm=1525352, long arm=1528042, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 279 a 719 c 679 g 387 t ORIGIN 1 aagtctcctc ttcttctacg tactcctcct cccccttctc ctcctcgccc cggcctccgc 61 ctccaccgtc gccatcgccg ccggccccac cgcctgcgcc gtcgcggagg gaaactccac 121 cgtctactgc gcctccgcca ccaactcgtc ctcctccgcc gccgtcgcgc cgttcgtcag 181 cttctcccag gtgtccggcg gcgggggggc gttcgtctgc gggctgcagg tcggggggcg 241 cgcgctcttc tgctggcccg ccgcggcgcc gggtcagctc aggcgggtgt acaacggccc 301 gggccagctg tcacagctcg ccgtcggggg cggccatgtc gcggcgtacg acgccgcggc 361 gcgggtgata cggtggtggc gtggcgggga ccggttccct ctctggttcg gcggtgggtt 421 cgcctccctc gtctccggcg acgacttcac ctgcgccgtg gagacgagca cctccgccgt 481 ccggtgctgg ggcccgcgcg gcggcgccgt ggaggcgggt tttctcaacg cctccgtctc 541 cgccctcgcc gcgggaggtt cccgcgcgtg cggggtgagg aggaacgacg gcggcgtgct 601 ctgctccggc ggtggcgtgc tcgcgccgcg cgaggacctg tacgtggacg gcctggccgt 661 cggcgactcc cacgcgtgcg gcctcctccg gccgaaccac accgccgcgt gctggagcct 721 cgggggcgcc accaccacgc tctactaccc ggcggtcggc acggcgttcg agctcctcgt 781 cgccggcggt aacctcacgt gcggcctcgt gtcggccaac ttcagcctgc tctgctggtc 841 gagggatggg ttggtggcgg cggaggtgaa cctgccgccg atcctccccg gcgtctgcgt 901 ctccgacaac agctcgtgca aatgcggccc gctcccggac tccgggaggt tctgcaaggt 961 ctccggcgac gtcatctgca gaaggttctg tgacacgttg ccgccgccgc cgccgccgtc 1021 tcctcgtacg ccgtcgccgc cggcgacccc gagctcgaga cgcggcgtgt ccaaaggctg 1081 gatcgcgttc gccgtcgtcg gcgcggtggg ctgcttcgcg gggctctgct ccatcgtcta 1141 ctgcctcctc ttcggcttct gcagccacaa gaaggtgcac aactctgtcc agcccaacat 1201 cgccggtggc cacgtcgtgg aagctgcgca tcaagatcct gctcgacgcg tcgcgcggca 1261 tcgactacct ccactcgtac gccgtgccgc cgatcatcca ccgcgacatc aagtcgtcga 1321 acatcctgct cgacggcagc tgggtggcgc gcgtgtcgga cttcgggctg tcgctgatgg 1381 ggccggagac ggaggaggtg aagcacctgt cgatgaaggc cgccgggacg gtggggtaca 1441 tggacccgga gtactacggc ctccaccacc tcaccgtcaa gagcgacgtc tacggcttcg 1501 gcgtcgtcat gctcgaggcg ctcaccggga agcgcgccat cttcaaggag gccgagggcg 1561 ggagccccgt cagcgtggtg gactacgccg tccccagcat cgtcgccggc gagctcagca 1621 aggtgctcga cgcccgcgcg ccggagccga gcgcgcacga ggccgaggcc gtcgagctgg 1681 tcgcctacac ggcggtgcac tgcgtccggc tggaggggaa ggaccggccg gcgatggcgg 1741 acatcgtggc caacctcgag acggcggtgg cgctctgcga ggacagcgcc accggcggcg 1801 gcgccgccgg ccatggcaac agctcgtcca gcgccagcct ctccatcacg tccatggagt 1861 tgagtaggat ggattgattg agattagtag cttccctaat tcaaatccag agtttcaaat 1921 tgtgattagc cccggaagga gattttaaaa tttgttgctt cacttcattt tttttagagg 1981 agaacatcat ttgtgtgatt ctctcacaca ttttgttcat ggtggctgta catgattttg 2041 tattgaactg atttctcttt tcat //