LOCUS       AK105424                2030 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:001-124-C05, full insert
            sequence.
ACCESSION   AK105424
VERSION     AK105424.1
KEYWORDS    oligo capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2030
                     /clone="001-124-C05"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2030
                     /db_xref="Osa1:LOC_Os01g73040"
                     /db_xref="RAP-DB:Os01g0961200"
                     /note="(RAP Annotation release2) CBS domain containing
                     protein"
                     /note="(Rice Genome Annotation Project) CBS domain
                     containing protein, expressed"
                     /note="mapping to R01-TIGRv4S1-002024F (Chr.1: short
                     arm=42704040, long arm=42708368, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          540 a          490 c          503 g          497 t
ORIGIN      
        1 gcagcttgcc ttggactcca ccatttcaaa tcccctgcct cctccgcctc cgcttccccc
       61 ctcaccttct ccggcgatcg ccgccgcgtc cgtacacggc tgaggcctga ggcgatggcc
      121 gccgccgccg cctcccagcc tcgcagccac cagcccacct cgctccgccg cgcgccgcca
      181 ccttcttcgg ccgcggccaa gccagagccc aatgagaagg cctccaactc caagcccgcc
      241 tcgcccgtcc aggcaccgtc gccggagagg acggtgaaga agctgaggtt ggccaaggcg
      301 ctcacgcttc cggaggccac ctcggtgtcg gaggcgtgcc ggaggatggc gctcaagcga
      361 gtggatgccg cgttgctcac tgattccaac gggatgctct ccggcatact cacagcagag
      421 gacatatcag gacgggtgat agcagaggga ctcaggcctg acgaaacaaa tgtggccaaa
      481 gcgatgacgc gtaacccagt ttttgttatg tccaactcac cagccattga agcattacaa
      541 aagatggtca aaggaaagtt cagacatctt cctgtagtgg aacacggtga ggtaattgcc
      601 atgctggaca ttaccaagtt cctttatgat gcaatttcaa gaatggaaaa ggctgcagaa
      661 caaggcagtg caatagcagc tgctatggaa ggagttgaac gacagtgggg aaatgacttt
      721 ccaggtccac attcatttat cgaaaatctg cgagaccagc tgttcaagcc ttccttatca
      781 accatcataa cagaaaataa cagtgttcca gtagtatctc cttcagatcc tgtaatagca
      841 gctgccaaaa aaaatgagag aataccgagt caactcagtg gttgtcatga cagggaacat
      901 gttgctagga attcttactt ccaaggattt ggtattgcga ttagtggccc aaagtttatc
      961 cccagatgtg actcttgtag aaaaggttat gactacaaac cctgattgtg cgacattgga
     1021 tacatcgatc cttgaggccc tgcattcaat gcaagacggg aaatatctgc atattcctgt
     1081 tgccgacaaa aatggacaga tcatcgcatg tttggatgct ctacaattaa cccatgcagc
     1141 tatttcaatg gttgagggag cttctgaagc gaacagtatg gcaaatacta tgatgcagaa
     1201 gttctgggat tcagctcttg ccctgcagcc tgcagaggaa tcggatgccc gtagtgaaaa
     1261 atctcgaatg gcaacatcag ataatgctga agggaaacat ataccccctc atgttggcaa
     1321 ttcattctcc tttaaactac aagatagaaa agggcgtatg cacagattca gttgtgtttc
     1381 agaaagctta gatgagcttg tttctgccgt atcgtacaga ctgggaatgg aaaaagagaa
     1441 gattaatctt ctgtatgatg acgatgaagg tgacagggtg gttctgacca ccgacggtga
     1501 cctcagtgcg gcaattcagc atgcgagatc agctggatgg aaggttctga ggctgcatat
     1561 ggatgagccc tggagcaatg gggagcacac cacatcgctt gtaaatactt caccggtgaa
     1621 aacagggcgg tcatttctcc ggctaggcat cgcagctggt gcagttgcgg ttgccagcat
     1681 gggggtaatc ttctacttga aacgttctga actataatta attcccacac atacatcaac
     1741 acatcaacat tgtaaagatt acttcttctc cggaaggtga gatgtgttgt atacgtagga
     1801 gacaaacacg tcaaacatca gcaataaggc gtggactatg gttagaaaga atttccacgt
     1861 gctaaagctt gtaagattgg atggtgtttc attcaatttt agattggttt attttgagac
     1921 agatggagca aagatttttt tgaggttttt tttcttgagt tttcttgttt cagccttcct
     1981 accctttttg caaccttgtg tgatataaat aagggattca accagcttgg
//