LOCUS AK104766 1295 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:001-038-H11, full insert sequence. ACCESSION AK104766 VERSION AK104766.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1295) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1295 /clone="001-038-H11" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 338..1036 /db_xref="Osa1:LOC_Os08g42400" /note="(Rice Genome Annotation Project) NAC domain-containing protein 68, putative, expressed" /note="mapping to R08-TIGRv4S1-000924F (Chr.8: short arm=26634130, long arm=26637264, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG96939.1" /translation="MERAAAAAPVVVRHGGVVLPPGFRFHPTDEELVVQYLRRKAFGL PLPAAVIPDLHNLFKLDPWDIPGASSDGDKYFFAVRPPAARGRRQHVTASGGCWKPAG GRDKPVVVARCGGSHLVGVKKGMVFVPRQGRKAPAAAAAAAGGGCWVMHEYSLALPMH KKGCLAEAEEWVVCRIFQRSSSGSRSPRRPDNDVRRTMPAVAELGRSPSPSSSSSQSS CVTSSSDQEEVSSG" BASE COUNT 264 a 357 c 397 g 277 t ORIGIN 1 aacacccaac cccctctctc tctctatctc tctcctctct ctctctctag ctctagctct 61 agctcgtcgc cgccatgaac gttccaagca aatgcatggc tcctgcaaag taaaaaaaga 121 agaagaagca gcagctgcag cttctcttca gtatcgatct ttaactgtat cgagctagct 181 tagcttagct tagctctctg ccattaactt gtgcttcact gagcttgagc tagctagctt 241 cttggctgtg tgactgagta gctctagctc ctcgtcgtcg tcgtcgtcgt cgtcgtcgtc 301 ggcgtcggtg gtggtgtgaa ttgatagaat tgatacgatg gagagggcgg ctgcggcggc 361 gccggtggtg gtgaggcatg gaggagtggt gttgccgccg gggttcaggt tccacccgac 421 ggacgaggag ctcgtggtgc agtacctccg ccgcaaggcg ttcggcctgc cgctccccgc 481 cgccgtcatc cccgacctcc acaacctctt caagctcgat ccctgggaca ttcctggtgc 541 gagcagcgac ggggacaagt acttcttcgc cgtgcggcca cctgcggcga gggggaggag 601 gcagcatgtg acggcgagcg gtgggtgctg gaagccggcg ggcgggcggg acaagccggt 661 ggtggtggcc cggtgcggcg ggagccacct cgtcggcgtc aagaagggca tggtgttcgt 721 cccacggcaa gggaggaagg caccggcggc ggcggcggcg gccgccggcg gtggctgctg 781 ggtcatgcac gagtacagcc tcgccctgcc gatgcacaag aagggttgct tggctgaggc 841 tgaagaatgg gtagtgtgcc ggatatttca gaggagcagc agcggcagcc ggtcgccgag 901 gaggcctgac aacgacgtga ggcgaacgat gccggccgtc gccgagctcg gccggtcgcc 961 gtcgccatcg tcgtcgtcgt cgcaatccag ctgcgtcaca agcagctccg accaggaaga 1021 ggtcagcagc ggctagctag ctgaagaaga atgcaggcag cagcagcaag cagctaagct 1081 gcctctcaaa gagaggcttg agtgttagcc tagctaagca tatatattta tagccggcca 1141 aaccctctga aagtgatctg catcaatgca tgcccccctt taatttcttc ttcctcctta 1201 attatttttt cccaaccatg taatgtaatg taatttaatg taatgcagtg taatgtaacg 1261 ggaaggaagc actgaattaa tcaaattaaa ttaac //