LOCUS       AK104603                1720 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:006-308-H06, full insert
            sequence.
ACCESSION   AK104603
VERSION     AK104603.1
KEYWORDS    oligo capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1720
                     /clone="006-308-H06"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             89..1537
                     /db_xref="Osa1:LOC_Os11g08300"
                     /db_xref="RAP-DB:Os11g0186200"
                     /note="(RAP Annotation release2) Similar to Aldehyde
                     dehydrogenase (EC 1.2.1.3)"
                     /note="(Rice Genome Annotation Project) aldehyde
                     dehydrogenase, dimeric NADP-preferring, putative,
                     expressed"
                     /note="mapping to R11-TIGRv4S1-000215F (Chr.11: short
                     arm=4371272, long arm=4375860, direction=forward) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG96824.1"
                     /translation="MAEEEVAAVVGELRGSFRSGRTRAAEWRAAQLRGIVRMVEEREG
                     DISDALHSDLAKPRMESYLHEISLAKAACTFALKGLKNWMKPEKVPAALTTFPSTAQI
                     VSEPLGVVLVISAWNYPFLLSIDPVIGAIAAGNAVVLKPSEIAPATSALFAKLLPEYV
                     DSSCIKVVEGGVPETTALLEQKWDKIFYTGSGNVGRIVMAAAAKHLTPVALELGGKCP
                     AIVDSNTDLHVTMKRLAVGKWGCNNGQACIAPDYVITTKSFAPELVDSLKRVLKRFYG
                     EDPLQSEDLSRIVNSNHFRRLTNLIEDKKVAQKIVYGGQTDEKQLKIAPTVLLDVPLD
                     TTLMAEEIFGPLLPIVTVDKIEDSIQFINSRTKPLAAYLFTKDKKLQEEFVSNVPAGG
                     MLVNDVALHLANPHLPFGGVGDSGIGSYHGKFSFDCFTHKKAVLIRGFGGEATARYPP
                     YTIEKQKILRGLINGSFFALILALLGFPKERR"
BASE COUNT          439 a          395 c          453 g          433 t
ORIGIN      
        1 ggctgcttcc tcctgactcc tctcctgcat tctctcgctt ctgacggcgg caactaagct
       61 ttttgggatt cgattcgagg aggaggtgat ggcggaggag gaggtggcgg cggtggtggg
      121 ggagctgagg gggagcttca ggtccgggag gacgagggcg gcggagtggc gggcggcgca
      181 gctgcggggg atcgtgagga tggtggagga gagggagggg gacatctccg acgcgctcca
      241 ctccgacctc gccaagcctc gcatggagtc ctacctccac gagatatcat tggcaaaggc
      301 agcctgcaca tttgccttga aggggttgaa gaattggatg aaacctgaga aggtacctgc
      361 cgccctcact acattcccat caactgcaca aattgtgtca gagcctcttg gtgtcgtcct
      421 agtcatctca gcatggaact accctttctt gctctccatc gacccagtca taggagcaat
      481 tgctgctggg aatgccgttg tgctgaagcc atcagaaatt gcaccagcca cctcagcatt
      541 gttcgccaag ctgctacctg aatacgttga tagctcttgc ataaaagtgg tggagggagg
      601 cgttccagaa acaaccgcac tcttagaaca aaagtgggat aagatcttct acacaggtag
      661 cggaaatgtg ggccgcatag tgatggcagc agctgcaaag catcttaccc ctgtggctct
      721 agagcttggt ggaaaatgcc ctgcaattgt tgattctaat actgatcttc atgttaccat
      781 gaagaggcta gctgttggca agtggggatg taacaacggg caggcatgca ttgctccaga
      841 ctacgttata acaacaaaat catttgctcc agagctggtt gactctttaa aaagagtttt
      901 gaaaaggttc tatggggagg atcctttgca atcagaagac ttgtcccgta ttgtgaattc
      961 taaccatttc cgtagattga caaatttgat agaggataag aaagtcgccc aaaagattgt
     1021 atatggtggc caaacagatg agaagcaact aaaaatagct cctactgtgt tgttagatgt
     1081 tcctcttgat acaacactca tggcagagga aatttttggt cccttacttc ccattgtaac
     1141 agttgacaag attgaagata gcatccagtt catcaactca aggaccaagc cacttgcagc
     1201 ctatcttttc accaaggaca agaaactgca agaggaattt gtgtccaatg tcccagcagg
     1261 aggaatgctt gtaaatgatg ttgccctgca tctcgccaat ccgcacctgc catttggcgg
     1321 agtcggcgac agcgggatcg gctcctacca tggcaaattc agcttcgatt gtttcaccca
     1381 caagaaggcc gtcctgatcc gcggcttcgg aggggaggca actgctaggt acccacctta
     1441 cacgattgag aagcagaaga tcctgagagg actgataaac ggcagcttct ttgcactgat
     1501 tcttgccctc ctgggcttcc ccaaagagag gcgttagaaa actttcagta gtttcagtac
     1561 agtacttgtg catttgagtg agtgcaggcc atgctgtcaa tggaagccat ttcctgcatg
     1621 ttgttttaca caggtgtaca ttatatttgt cggattttct tgtgtaactt attgaaaatt
     1681 ctactacaca gggttacata aataaacatg atttgtcagt
//