LOCUS AK103407 2424 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033128D14, full insert sequence. ACCESSION AK103407 VERSION AK103407.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2424) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2424 /clone="J033128D14" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2424 /db_xref="Osa1:LOC_Os03g57940" /note="(Rice Genome Annotation Project) ATP binding protein, putative, expressed" /note="mapping to R03-TIGRv4S1-001604F (Chr.3: short arm=32938488, long arm=32945584, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 646 a 522 c 658 g 598 t ORIGIN 1 gtcacgcgag cgacgcgggc gctccacgat ttctctgcct cccccccccc ctcggtctcc 61 tcctccccca ccaccaccgc acgcttcccg aggcgccgcc ctccgccgcc gcgggcatcc 121 gcttccgacg acgatattgg aaggagcacc gaagggtgta gcacaaggcc gagttgcatg 181 gggcgataat gccagagttg cggggtggtg tttggagagc tcgtctgagg tccaagaagg 241 tttacgacgt ccaggacgca gatccagctg cgagtccggt gtcgccagct ccgcggggga 301 ggactggaag gcgcggcggt gctgcggctg gcagaggcaa caagacagtt gctgagggag 361 gagggaggaa agctctgaag cctagaggaa aggggtgcag ggctgttgat ttgtgtaagg 421 atcaaccttg caaggacctc cctgaagtta ttgctagaaa ggcggttacc ggcaaagccc 481 aggaggacct tggtttgaac aaggtagctg acagagctgc gaacttgatg atggacggcg 541 aaagtggaga caaatttgct gcggcagaag atgaatccac tacaacacca gttcctgagc 601 gggttcaagt aggcaattcc ccagagtata taactgatag gaagttgggt aaaggtggat 661 ttggtcaggt ctatgttggt cgaagagtat ctggtggagg ttctcgcacg ggtccagatg 721 cgcaagaggt tgcgcttaaa tttgagcacc gaagcagtaa aggatgtaac tatggccctc 781 catacgagtg gcaggtttac cacactctca atggttgtta tggcatacca tcagtccact 841 ataagggtcg tttgggagac tactacattc ttgtaatgga tatgcttggt cccagcctct 901 gggatgtgtg gaattcagtg ggacaggcga tgtctgccca tatggttgct tgcattgctg 961 tggaagcgat atcaattctt gagaagcttc actctaaagg gtttgtacat ggtgatgtca 1021 aaccagagaa ttttttgctt ggtcatcctg ggtcagttga tgagaagaag cttttcctga 1081 ttgatcttgg tttagcatcc aggtggaaag aagcatcatc tggtcagcat gttgactatg 1141 atcagaggcc agatgtcttt aggggaacaa ttagatacgc tagcgtccat gcccacttag 1201 gtcgtacagg tagcaggagg gatgatttag agtcactggc ttacacccta atctttttaa 1261 taagagggag attaccttgg caagggtatc agggagataa caagagtttt cttgtttgta 1321 agaagaaaat ggctacttca ccagagttgc tgtgttgctt ctgtccagct ccgttcaaac 1381 attttctaga gatggtcact agcatgaaat ttgacgaaga gccaaactat ccaaaactta 1441 tttctctctt tgatggtttg attgaagggc ctgcttcaag gcccatcaga attgatggag 1501 ctctgaaggt tgggcaaaaa cgtggaagaa tggttgtaaa tcttgacgat gatgaacagc 1561 ccaagaagaa agttaggttg ggaagcccag caactcaatg gatctcagtt tataatgcta 1621 ggcggcccat gaagcagaga tatcactata atgttgctga ttcaaggctg catcagcata 1681 tagaaaaagg caatgaagat gggctgtaca ttagttgtgt ctcttcttcc gcaaattttt 1741 gggctctcat aatggatgct gggactggct tttgttccca agtttatgag ctttcacaag 1801 tgtttctgca caaggattgg attatggagc agtgggagaa gaattattac ataacggcaa 1861 tagcaggagc aaccaatgga agctcattgg ttgtaatgtc caaaggaact ccatacacac 1921 agcagtcata caaagtcagt gaatcctttc cttacaagtg gattaacaaa aagtggaaag 1981 aaggtttcca tgtgacatct atggctactg ctggaaaccg ttggggagtt gtcatgtcaa 2041 gaaatgcagg ctattcccat caggtggtag agttggactt tctatatcca agtgaaggga 2101 tccatcggcg atgggagaca ggttacagaa taacttcgac tgcagcaact cctgaccaag 2161 ctgccttcat cttgagcata ccaaagagga agccaatgga cgagacacaa gaaactcttc 2221 gaacttcctc ctttcccagc aaccatgtca aggaaaaatg gtcaaagaac ctatacatcg 2281 cttcaatctg ctacggccgg accgtatgct gacagcttca acatttcgaa gctccaatgt 2341 gaagccatgt ctagctacta ctagcatttt gcagtgagct gccaaccgat caaatctccc 2401 ttgattggga gatctgaagc aagg //