LOCUS AK102105 2637 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033084D07, full insert sequence. ACCESSION AK102105 VERSION AK102105.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2637) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2637 /clone="J033084D07" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2637 /db_xref="Osa1:LOC_Os10g35560" /note="(Rice Genome Annotation Project) expressed protein" /note="mapping to R10-TIGRv4S1-000547F (Chr.10: short arm=18690288, long arm=18695772, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 700 a 566 c 645 g 726 t ORIGIN 1 gtttggtcca caagagttaa caaaagcatc ccaccatctg aggaccttaa gaaccctcaa 61 tcatatgttc caatgccaac aacttcagat gagcggagtt cttctgagtg cagtgttgat 121 agggcgaacc gacttagctt tgacccttat gatcttccaa atgatgtcag acaattggcc 181 caaatagttt attctgctca tggtggtgag gttgcagttg cattcctgcg tggaggtgtg 241 cacatttttt caggtccaaa ctttgaacag gttgatagct atcatgtcaa tgttggctca 301 gcaattgctc caccagcctt ctcctccagt ggttgttgct tggcatcagt atggcatgac 361 acactcaaag atcgaaccat actaaagata atacgtgtgc ttcctcctgc aattcttaat 421 gctcagacaa aggttagctc agctgtttgg gaacgagcaa tagcagatag attttggtgg 481 agtctattgg ctggtgtgga ttggtgggat gctgttggct gcacacaaag tgctgctgaa 541 gatggtattg tctcactgaa cagtgtgata gctttgctgg acgcggactt ccattgtctt 601 ccaactatac aacagaggca acaacactgt cctaatcttg ataggataaa gtgtagattg 661 ttggaaggaa caaatgctca agatgtcaga gcacttgtgt tggacatgca agcaagattg 721 cttctggata tgcttggcaa gggaattgag tctgccctga taaatccatc aactctgcta 781 cctgaaccgt ggcaagcttc cagtgacatg ttatctagca ttgggcctga caaaatgact 841 gttgacccag ctctactttt aagcatccag gggtacgttg atgctgttct agatttagcg 901 tcacatttta tcacacgctt gcgacgctat gcgagcttct gccgaacttt ggctagccat 961 gcagttggag catcttctgg ttcaggcaat tctaggaata tggttacaag tccaaccaac 1021 agttctcctt caccttcaac taaccaaggt aatcaaggtg gagtagcgtc tacaacaggg 1081 agctcacaaa tgcaagagtg ggtccaaggt gccattgcta agattagtaa caatactgat 1141 ggtgctgcaa atgctgcacc aaatccaatt agcgggaggt catcattcat gcctattagc 1201 ataaatacgg gaacattccc tggcacacca gctgttagac ttattgggga ctgccatttc 1261 cttcatagat tatgtcagct gttgctattt tgtttgcttt ttcggagaag gcaatctcca 1321 aggatacctg caaatgcaca aaaaagttct gattctagca tgcagaaaca acacttgatg 1381 aacagtaaga cagaggataa tactttggca gtcagatctg gtctaggtgc tgccaaattg 1441 gaagatggca caacttcacg tggacagatg gttggagcaa agggtgctga agaaaatcca 1501 gtgggcaaca aatctgctag gataggttct ggcaatgctg gccaaggtta tacttcagac 1561 gaggtgaaag tcctttttct catattagtt gacctatgta aacggactgc aaccttgcaa 1621 catccgttgc cttcttctca ggttggttcg agcaatatta ttataaggct gcattacatc 1681 gatggcaatt acactgtgct ccctgaggta gtggaagcat ctcttggccc tcatatgcag 1741 aatatgcctc gtccacgtgg agctgatgct gctggccttc tacttcgaga attagaactg 1801 cagccccctg ctgaagaatg gcatagacgc aacatgtttg gtgggccatg gtcagaacca 1861 gatgatcttg gtccattgga taatacgcga cagctaaaaa tcaatggctc taccaatcgc 1921 cacttatcgg acatggaaga ggatggcgac agctcctttg ggattcaaaa tctttggcca 1981 agaaagcgcc ggttgtctga aagagatgca gcatttggtc tgaaaacatc cgtggggctg 2041 ggatcttttc taggtgtgat gggttctcgg agagatgtta ttacagctgt gtggaaaaca 2101 ggcctcgaag gtgaatggta caagtgcata cgatgtttga ggcaaacctg tgcatttgct 2161 cagcctggtg ctctagctcc gaacacgtcg aatgagcttg aggcatggtg gatcagccga 2221 tggacccatg cttgcccaat gtgcggtggg acatgggtga aagtcgtttg aatttgacgc 2281 ctccgggcga caccttcacc gtactaacca ctctgccaat agctttctcg gccaaatctg 2341 tgtaggcgcc atcggttttt ggacaatttt gtatctaact ttagattgtt tggtctcagg 2401 ccctccctgg tatggtatca tagtttacct gcagcagtca gagcagattg caccagcagc 2461 tgtgtaaaac ggtaggaaaa aacaggatta ggacatgccc aaacactgtc agagtcagca 2521 gttgtgttgt gcgatccttt tgtacataaa tgtagtgtac taatttgcaa cattggaaaa 2581 gaaactccgt tagatactgc ttgatgtcaa taatatttgc tggtgattga aaagacc //