LOCUS       AK101301                2717 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033033K06, full insert
            sequence.
ACCESSION   AK101301
VERSION     AK101301.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2717
                     /clone="J033033K06"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             96..2426
                     /db_xref="Osa1:LOC_Os07g27330"
                     /db_xref="RAP-DB:Os07g0456900"
                     /note="(RAP Annotation release2) No apical meristem (NAM)
                     protein domain containing protein"
                     /note="(Rice Genome Annotation Project) no apical
                     meristem protein, expressed"
                     /note="mapping to R07-TIGRv4S1-000463R (Chr.7: short
                     arm=15897736, long arm=15900452, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG94999.1"
                     /translation="MAAAADGLPPGVRFDPADDELVSRYLLRRLRKQPIPLHGVIHEA
                     DPLGAPPWMLLAAHGRGGDEAFFFAEARAKNVRGKRQKRTVEGGGFWQGQRVCIDGER
                     LRVPGDGGGGEVGGELEIEWRKYMLSFFAEGERGSSGWVMHEYAITAPADLASSPIRL
                     YRVRFSGHGKKRKREPERLGARVHDDDVDGGERAAPRRAVAETALFVQQSSAVDCAES
                     ADQSFSGVIEPVFHDLPDMMPEQADAGDTAETTAAVVNLTDAMTEQPVLPLAADGDDQ
                     SSYGVIDPAFRDLADLMVLPPVLAQQEPPLAPVAMVDLPPGNADCADHQSCSGVIDPA
                     FRDLPDMTVLPPEQADTGGGAETTTAMVSLTDKLKYSSSMDGEAAPAWCDFDFPESTD
                     EVLSYMNFTAGAHDNNDGSVGRAAPWRPVSEIAMFEQPSAVDLPPGDADCTESADQSF
                     SGVIEPVFHDLPDMIREQADAGDTAETTAAVVNQNYSMALCDFDSGIDFTAGAHDSGM
                     ERATPWTPMSEAALFEQQGPPLAPAAVVDLPPGNADCADHQSSYGDMIVLPSEQAGAG
                     GGAETTEALFDQPVPPLAADCANQGSYGVIDPVFRDLADLIVLPPEQADAMDGEAAPA
                     WCDFDFPENIDEALSYVDFTAGAHADNDGGVSETAMFEQPGSPPQHDPLLMDADGADQ
                     SSSSGALIDTVFGDHAEPIVLPLEQADTGGGAAAAVKLMDKQKYSSSSMDGEEAPAWC
                     DSDFPESIDEVLSYVDFSTDGASCDFSMDELFDLAD"
BASE COUNT          519 a          847 c          829 g          522 t
ORIGIN      
        1 ggcttccgcc tctcctcgcc tcctcccttc ctttcccccc caaaccctag aattcccccc
       61 cacaaaaccc tagaattcgc gcgatcgagg cggctatggc ggcggccgcg gatgggcttc
      121 cgccgggcgt caggttcgac cccgccgacg acgagctcgt ctcccgctac ctgctccggc
      181 gcctccggaa gcagcccatc ccgctccacg gcgtcatcca cgaggcggat cccctcggcg
      241 cgccgccatg gatgctcctc gccgctcacg gccggggcgg cgacgaggcc ttcttcttcg
      301 ccgaggcgcg cgccaagaac gtcaggggga agcggcagaa gcgtaccgtc gagggtgggg
      361 ggttctggca ggggcagcgg gtgtgcatcg acggcgagag gctgcgcgtc cccggcgacg
      421 gcggcggcgg cgaagtcggc ggggaattgg agatcgagtg gcggaagtac atgctgagct
      481 tcttcgccga gggggagagg ggcagctcgg ggtgggtgat gcacgagtac gccatcacgg
      541 cgcccgctga cctcgcctcg tcgccgatcc ggctttaccg cgtccggttc agcggccacg
      601 gcaagaagcg caagcgggag ccggaacgcc tgggcgcccg cgtccacgac gacgacgtcg
      661 acggtggaga acgcgccgcg ccccggcgcg ccgtggcaga gaccgccctg ttcgtgcagc
      721 agtcgagcgc cgtggattgc gccgaatccg ccgatcagag cttctccggc gtgatcgagc
      781 ctgtgttcca cgatctcccc gacatgatgc cagagcaagc tgatgccgga gacactgcag
      841 agactacagc agcggtggtg aacctcacgg acgccatgac cgagcagccc gttcttccgc
      901 tagcagcaga tggcgacgat cagagctcct acggtgtcat cgatccggcg ttccgcgatc
      961 ttgctgacct gatggtcctg ccacctgtgc tcgcgcagca ggagcctccg ctcgcgcccg
     1021 tggcaatggt ggatctccct cctggcaatg ctgattgcgc cgatcatcag agctgctctg
     1081 gcgtgatcga cccggcgttc cgtgatctcc ccgacatgac cgtgctgcca ccagagcaag
     1141 ctgacaccgg aggcggagca gagactacca cagcaatggt gagcctcacg gacaagctga
     1201 aatactcctc ctccatggac ggcgaggcag cgccggcgtg gtgtgatttc gattttccag
     1261 agagcactga tgaggtgctc agctacatga acttcaccgc cggtgcccac gacaacaatg
     1321 acggcagtgt gggacgcgcc gcgccatggc gtcccgtgtc agagatcgcc atgttcgagc
     1381 agccgagcgc cgtggatctc cctcctggcg atgctgattg cactgaatcc gccgatcaga
     1441 gcttctccgg cgtgatcgag ccggtgttcc atgatctccc cgacatgatc cgtgagcaag
     1501 ctgatgccgg agacaccgca gagactactg cagcggtggt gaaccagaac tactccatgg
     1561 cgttgtgtga tttcgacagc ggcattgact tcaccgccgg cgcccacgac agcggcatgg
     1621 aacgcgccac gccctggact cccatgtcag aggccgccct gttcgagcag caagggcctc
     1681 cgctcgctcc cgcggcagtg gtggatctcc ctcctggcaa tgctgattgt gccgatcatc
     1741 agagctccta cggtgacatg atcgtcctgc catcagagca agctggcgcc ggaggcggag
     1801 cagagactac cgaggccctg ttcgaccagc ccgttccgcc gcttgcagca gattgcgcca
     1861 atcagggctc ctacggcgtg atcgacccgg tgttccgcga tctcgccgac ttgatcgttc
     1921 tgccaccaga gcaggccgac gccatggacg gcgaggcggc gccggcgtgg tgtgatttcg
     1981 attttccgga gaacattgat gaggcgctca gctacgtcga cttcaccgcc ggcgcccacg
     2041 ctgacaacga cggtggcgtg tcagagaccg ccatgttcga gcagccgggg tctccgccac
     2101 agcacgatcc tctgctgatg gatgctgatg gcgccgatca gagctcctcc tccggcgcgc
     2161 tgatcgacac ggtgttcggt gatcacgccg aaccgatcgt cctgccactg gagcaagctg
     2221 acaccggagg tggtgcagca gcggcggtga aactcatgga caagcagaag tactcctcct
     2281 cctccatgga tggcgaggag gcgccggcgt ggtgtgattc ggatttcccg gagagcattg
     2341 acgaggtgct cagctatgtc gacttcagca ccgatggcgc gagctgcgac ttctccatgg
     2401 acgagctctt cgatcttgca gattagttag catcctggag atagcaagcc accaagaaca
     2461 ctggcattga cattgtcttt ctaagaagag ctgtaatcag tagcgcaaag gcgagatttg
     2521 ttgatattct ggtgtaatct gtagactaga ggcagagtag atagatgttc cttagtttat
     2581 tgactaatct atgcatagat gagttatttg tttattgatt gaactcaatg taagtaacat
     2641 tattgtaagt aatgaatata ctcccttttc aatcattata ttccctattc aaaatcaata
     2701 tactgcattg atctgcc
//