LOCUS AK101301 2717 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033033K06, full insert sequence. ACCESSION AK101301 VERSION AK101301.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2717) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2717 /clone="J033033K06" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 96..2426 /db_xref="Osa1:LOC_Os07g27330" /db_xref="RAP-DB:Os07g0456900" /note="(RAP Annotation release2) No apical meristem (NAM) protein domain containing protein" /note="(Rice Genome Annotation Project) no apical meristem protein, expressed" /note="mapping to R07-TIGRv4S1-000463R (Chr.7: short arm=15897736, long arm=15900452, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAG94999.1" /translation="MAAAADGLPPGVRFDPADDELVSRYLLRRLRKQPIPLHGVIHEA DPLGAPPWMLLAAHGRGGDEAFFFAEARAKNVRGKRQKRTVEGGGFWQGQRVCIDGER LRVPGDGGGGEVGGELEIEWRKYMLSFFAEGERGSSGWVMHEYAITAPADLASSPIRL YRVRFSGHGKKRKREPERLGARVHDDDVDGGERAAPRRAVAETALFVQQSSAVDCAES ADQSFSGVIEPVFHDLPDMMPEQADAGDTAETTAAVVNLTDAMTEQPVLPLAADGDDQ SSYGVIDPAFRDLADLMVLPPVLAQQEPPLAPVAMVDLPPGNADCADHQSCSGVIDPA FRDLPDMTVLPPEQADTGGGAETTTAMVSLTDKLKYSSSMDGEAAPAWCDFDFPESTD EVLSYMNFTAGAHDNNDGSVGRAAPWRPVSEIAMFEQPSAVDLPPGDADCTESADQSF SGVIEPVFHDLPDMIREQADAGDTAETTAAVVNQNYSMALCDFDSGIDFTAGAHDSGM ERATPWTPMSEAALFEQQGPPLAPAAVVDLPPGNADCADHQSSYGDMIVLPSEQAGAG GGAETTEALFDQPVPPLAADCANQGSYGVIDPVFRDLADLIVLPPEQADAMDGEAAPA WCDFDFPENIDEALSYVDFTAGAHADNDGGVSETAMFEQPGSPPQHDPLLMDADGADQ SSSSGALIDTVFGDHAEPIVLPLEQADTGGGAAAAVKLMDKQKYSSSSMDGEEAPAWC DSDFPESIDEVLSYVDFSTDGASCDFSMDELFDLAD" BASE COUNT 519 a 847 c 829 g 522 t ORIGIN 1 ggcttccgcc tctcctcgcc tcctcccttc ctttcccccc caaaccctag aattcccccc 61 cacaaaaccc tagaattcgc gcgatcgagg cggctatggc ggcggccgcg gatgggcttc 121 cgccgggcgt caggttcgac cccgccgacg acgagctcgt ctcccgctac ctgctccggc 181 gcctccggaa gcagcccatc ccgctccacg gcgtcatcca cgaggcggat cccctcggcg 241 cgccgccatg gatgctcctc gccgctcacg gccggggcgg cgacgaggcc ttcttcttcg 301 ccgaggcgcg cgccaagaac gtcaggggga agcggcagaa gcgtaccgtc gagggtgggg 361 ggttctggca ggggcagcgg gtgtgcatcg acggcgagag gctgcgcgtc cccggcgacg 421 gcggcggcgg cgaagtcggc ggggaattgg agatcgagtg gcggaagtac atgctgagct 481 tcttcgccga gggggagagg ggcagctcgg ggtgggtgat gcacgagtac gccatcacgg 541 cgcccgctga cctcgcctcg tcgccgatcc ggctttaccg cgtccggttc agcggccacg 601 gcaagaagcg caagcgggag ccggaacgcc tgggcgcccg cgtccacgac gacgacgtcg 661 acggtggaga acgcgccgcg ccccggcgcg ccgtggcaga gaccgccctg ttcgtgcagc 721 agtcgagcgc cgtggattgc gccgaatccg ccgatcagag cttctccggc gtgatcgagc 781 ctgtgttcca cgatctcccc gacatgatgc cagagcaagc tgatgccgga gacactgcag 841 agactacagc agcggtggtg aacctcacgg acgccatgac cgagcagccc gttcttccgc 901 tagcagcaga tggcgacgat cagagctcct acggtgtcat cgatccggcg ttccgcgatc 961 ttgctgacct gatggtcctg ccacctgtgc tcgcgcagca ggagcctccg ctcgcgcccg 1021 tggcaatggt ggatctccct cctggcaatg ctgattgcgc cgatcatcag agctgctctg 1081 gcgtgatcga cccggcgttc cgtgatctcc ccgacatgac cgtgctgcca ccagagcaag 1141 ctgacaccgg aggcggagca gagactacca cagcaatggt gagcctcacg gacaagctga 1201 aatactcctc ctccatggac ggcgaggcag cgccggcgtg gtgtgatttc gattttccag 1261 agagcactga tgaggtgctc agctacatga acttcaccgc cggtgcccac gacaacaatg 1321 acggcagtgt gggacgcgcc gcgccatggc gtcccgtgtc agagatcgcc atgttcgagc 1381 agccgagcgc cgtggatctc cctcctggcg atgctgattg cactgaatcc gccgatcaga 1441 gcttctccgg cgtgatcgag ccggtgttcc atgatctccc cgacatgatc cgtgagcaag 1501 ctgatgccgg agacaccgca gagactactg cagcggtggt gaaccagaac tactccatgg 1561 cgttgtgtga tttcgacagc ggcattgact tcaccgccgg cgcccacgac agcggcatgg 1621 aacgcgccac gccctggact cccatgtcag aggccgccct gttcgagcag caagggcctc 1681 cgctcgctcc cgcggcagtg gtggatctcc ctcctggcaa tgctgattgt gccgatcatc 1741 agagctccta cggtgacatg atcgtcctgc catcagagca agctggcgcc ggaggcggag 1801 cagagactac cgaggccctg ttcgaccagc ccgttccgcc gcttgcagca gattgcgcca 1861 atcagggctc ctacggcgtg atcgacccgg tgttccgcga tctcgccgac ttgatcgttc 1921 tgccaccaga gcaggccgac gccatggacg gcgaggcggc gccggcgtgg tgtgatttcg 1981 attttccgga gaacattgat gaggcgctca gctacgtcga cttcaccgcc ggcgcccacg 2041 ctgacaacga cggtggcgtg tcagagaccg ccatgttcga gcagccgggg tctccgccac 2101 agcacgatcc tctgctgatg gatgctgatg gcgccgatca gagctcctcc tccggcgcgc 2161 tgatcgacac ggtgttcggt gatcacgccg aaccgatcgt cctgccactg gagcaagctg 2221 acaccggagg tggtgcagca gcggcggtga aactcatgga caagcagaag tactcctcct 2281 cctccatgga tggcgaggag gcgccggcgt ggtgtgattc ggatttcccg gagagcattg 2341 acgaggtgct cagctatgtc gacttcagca ccgatggcgc gagctgcgac ttctccatgg 2401 acgagctctt cgatcttgca gattagttag catcctggag atagcaagcc accaagaaca 2461 ctggcattga cattgtcttt ctaagaagag ctgtaatcag tagcgcaaag gcgagatttg 2521 ttgatattct ggtgtaatct gtagactaga ggcagagtag atagatgttc cttagtttat 2581 tgactaatct atgcatagat gagttatttg tttattgatt gaactcaatg taagtaacat 2641 tattgtaagt aatgaatata ctcccttttc aatcattata ttccctattc aaaatcaata 2701 tactgcattg atctgcc //