LOCUS AK091708 2496 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ34389 fis, clone HCHON2000087.
ACCESSION AK091708
VERSION AK091708.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2496)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tanigami,A., Fujiwara,T., Shibahara,T., Goto,Y., Hirao,M.,
Shimizu,F., Wakebe,H., Ono,T., Hishigaki,H., Watanabe,T.,
Ozaki,K., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K.,
Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2496
/cell_type="chondrocytes (HC)"
/clone="HCHON2000087"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000016575"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 442..1857
/codon_start=1
/protein_id="BAC03728.1"
/translation="MENLKHIITLGQVIHKRCEEMKYCKKQCRRLGHRVLGLIKPLEM
LQDQGKRSVPSEKLTTAMNRFKAALEEANGEIEKFSNRSNICRFLTASQDKILFKDVN
RKLSDVWKELSLLLQVEQRMPVSPISQGASWAQEDQQDADEDRRAFQMLRRDNEKIEA
SLRRLEINMKEIKETLRQYLPPKCMQEIPQEQIKEIKKEQLSGSPWILLRENEVSTLY
KGEYHRAPVAIKVFKKLQAGSIAIVRQTFNKEIKTMKKFESPNILRIFGICIDETVTP
PQFSIVMEYCELGTLRELLDREKDLTLGKRMVLVLGAARGLYRLHHSEAPELHGKIRS
SNFLVTQGYQVKLAGFELRKTQTSMSLGTTREKTDRVKSTAYLSPQELEDVFYQYDVK
SEIYSFGIVLWEIATGDIPFQGCNSEKIRKLVAVKRQQEPLGEDCPSELREIIDECRA
HDPSVRPSVDEILKKLSTFSK"
BASE COUNT 730 a 587 c 656 g 523 t
ORIGIN
1 agaaagcggc tccagggagc cagggcaccg tgagcctggt ggttggcagc tggagccacg
61 tcggaggggg aagtgtcgca gcattctctg caggcatcac agacctgagg cagtggcctc
121 cggagggcac tggacagaaa cagccatcca agtggctgag tggagggacc ctgctcaagt
181 gcagctgcag tggccggggt ttccctcagg tagggatcgg ggcgccttgt cgccgccagc
241 cacgtgtggc gtccggtaca gtcagcagag tgcagggtgc gggcaccagg aaagggggcg
301 caggggaact cccgcgggcc tcgcgtttgc aaacttctcg cctgggcagg aggcggtcgt
361 gggaaagaag gtggaagagc gagctttttg gaactgtgca cgggacagat tggacgcaca
421 cccctcggga ggcgcgaagg catggaaaat ttgaagcata ttatcaccct tggccaggtc
481 atccacaaac ggtgtgaaga gatgaaatac tgcaagaaac agtgccggcg cctgggccac
541 cgcgtcctcg gcctgatcaa gcctctggag atgctccagg accaaggaaa gaggagcgtg
601 ccctctgaga agttaaccac agccatgaac cgcttcaagg ctgccctgga ggaggctaat
661 ggggagatag aaaagttcag caatagatcc aatatctgca ggtttctaac agcaagccag
721 gacaaaatac tcttcaagga cgtgaacagg aagctgagtg atgtctggaa ggagctctcg
781 ctgttacttc aggttgagca acgcatgcct gtttcaccca taagccaagg agcgtcctgg
841 gcacaggaag atcagcagga tgcagacgaa gacaggcgag ctttccagat gctaagaaga
901 gataatgaaa aaatagaagc ttcactgaga cgattagaaa tcaacatgaa agaaatcaag
961 gaaactttga ggcagtattt accaccaaaa tgcatgcagg agatcccgca agagcaaatc
1021 aaggagatca agaaggagca gctttcagga tccccgtgga ttctgctaag ggaaaatgaa
1081 gtcagcacac tttataaagg agaataccac agagctccag tggccataaa agtattcaaa
1141 aaactccagg ctggcagcat tgcaatagtg aggcagactt tcaataagga gatcaaaacc
1201 atgaagaaat tcgaatctcc caacatcctg cgtatatttg ggatttgcat tgatgaaaca
1261 gtgactccgc ctcaattctc cattgtcatg gagtactgtg aactcgggac cctgagggag
1321 ctgttggata gggaaaaaga cctcacactt ggcaagcgca tggtcctagt cctgggggca
1381 gcccgaggcc tataccggct acaccattca gaagcacctg aactccacgg aaaaatcaga
1441 agctcaaact tcctggtaac tcaaggctac caagtgaagc ttgcaggatt tgagttgagg
1501 aaaacacaga cttccatgag tttgggaact acgagagaaa agacagacag agtcaaatct
1561 acagcatatc tctcacctca ggaactggaa gatgtatttt atcaatatga tgtaaagtct
1621 gaaatataca gctttggaat cgtcctctgg gaaatcgcca ctggagatat cccgtttcaa
1681 ggctgtaatt ctgagaagat ccgcaagctg gtggctgtga agcggcagca ggagccactg
1741 ggtgaagact gcccttcaga gctgcgggag atcattgatg agtgccgggc ccatgatccc
1801 tctgtgcggc cctctgtgga tgaaatctta aagaaactct ccaccttttc taagtagtgt
1861 atcaaaatct aaaccaagga tccctggaca agaagctggg agaggcacaa actggacatc
1921 tctctctctc atatccttcg gcattgggtt atctatggga gcaaggagtg gcacgcttct
1981 ctgttacaaa tagaaaacga ttccagtcat acaggacaca tcccactcca aatgatattt
2041 ccaaaaacat acctctgaca gtaactttga tagatggttt gtcaaatgta tctttctggg
2101 tatccacacc tcttggcaat gaaatttgca gctcctccct tccataaatg aagtctcttt
2161 ccccaccatt tgaatctggg ctggcactgt gacttgattt gatcaataga atgtggaaga
2221 agtgactgta tgccagttcc aagcctaggt ttcaagaggc cttataaatg tctgttggaa
2281 ccttacccag ccatgaacat gttgagtgag catgctggag aatgagagac cacatgaagc
2341 agaaacatgc tttcctagct gaagtcatac tagcccaacc aacatggcag ctaacacatg
2401 aatgaggcca atcaagacca gaagaaccac tcaagcagat cccagcccaa attgcccatt
2461 cacacaatca ggagctaaat aaattactgt tgtctt
//