LOCUS       AK089615                1130 bp    mRNA    linear   HTC 06-OCT-2010
DEFINITION  Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830005B18 product:unclassifiable, full insert
            sequence.
ACCESSION   AK089615
VERSION     AK089615.1
KEYWORDS    HTC_FLI; HTC; CAP trapper.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Bono,H.,
            Carninci,P., Fukuda,S., Furuno,M., Hanagaki,T., Hara,A.,
            Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hirozane,T., Hori,F., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I.,
            Kasukawa,T., Katoh,H., Kawai,J., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A.,
            Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numazaki,R., Ohno,M.,
            Ohsato,N., Okazaki,Y., Saito,R., Saitoh,H., Sakai,C., Sakai,K.,
            Sakazume,N., Sano,H., Sasaki,D., Shibata,K., Shinagawa,A.,
            Shiraki,T., Sogabe,Y., Tagami,M., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Takeda,Y., Tanaka,T., Tomaru,A., Toya,T.,
            Yasunishi,A., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Yoshihide Hayashizaki
            The Institute of Physical and Chemical Research (RIKEN), Omics
            Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho,
            Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
            URL    :http://www.osc.riken.jp/
REFERENCE   2
  AUTHORS   
  CONSRTM   The FANTOM Consortium, Riken Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The Transcriptional Landscape of the Mammalian Genome
  JOURNAL   Science 309, 1559-1563 (2005)
REFERENCE   3
  AUTHORS   
  CONSRTM   RIKEN Genome Exploration Research Group and Genome Science Group
            (Genome Network Project Core Group) and the FANTOM Consortium
  TITLE     Antisense Transcription in the Mammalian Transcriptome
  JOURNAL   Science 309, 1564-1566 (2005)
REFERENCE   4
  AUTHORS   
  CONSRTM   The FANTOM Consortium and the RIKEN Genome Exploration Research
            Group Phase I and II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420, 563-573 (2002)
REFERENCE   5
  AUTHORS   
  CONSRTM   The RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409, 685-690 (2001)
REFERENCE   6
  AUTHORS   Carninci,P. and Hayashizaki,Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Meth. Enzymol. 303, 19-44 (1999)
REFERENCE   7
  AUTHORS   Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K.,
            Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res. 10, 1617-1630 (2000)
REFERENCE   8
  AUTHORS   Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N.,
            Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T.,
            Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M.,
            Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S.,
            Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y.,
            Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K.,
            Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M.,
            Inoue,Y., Kira,A. and Hayashizaki,Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system-384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res. 10, 1757-1771 (2000)
COMMENT     cDNA library was prepared and sequenced in Mouse Genome
            Encyclopedia Project of Genome Exploration Research Group in Riken
            Genomic Sciences Center and Genome Science Laboratory in RIKEN.
            Division of Experimental Animal Research in Riken contributed to
            prepare mouse tissues.
            Tissues were provided by Dr. John Todd (Dept. of Medical Genetics
            Wellcome Trust Centre for Molecular Mechanisms in Disease Wellcome
            Trust/MRC building Addenbrookes Hospital Cambridge) whose
            assistance we gratefully acknowledge.
            
            Please visit our web site for further details.
            URL:http://www.osc.riken.jp/
            URL:http://fantom.gsc.riken.jp/
            
            clone information is available at:
            http://fantom.gsc.riken.jp/3/db/annotate/
            main.cgi?masterid=F830005B18
FEATURES             Location/Qualifiers
     source          1..1130
                     /clone="F830005B18"
                     /clone_lib="RIKEN full-length enriched mouse cDNA library"
                     /db_xref="FANTOM_DB:F830005B18"
                     /db_xref="MGI:2428521"
                     /db_xref="taxon:10090"
                     /mol_type="mRNA"
                     /organism="Mus musculus"
                     /strain="NOD"
                     /tissue_type="activated spleen"
     misc_feature    1..1130
                     /note="putative"
                     /note="unclassifiable"
BASE COUNT          283 a          275 c          252 g          320 t
ORIGIN      
        1 gcagtctttt cgcctctaca atcaagctct cccaataaac gtgtgcagaa ggatcctgtt
       61 gcagcgtcgt tcttcctggc cagtcgagcg cgcgcaagag aagagtataa gagtattcca
      121 ttgtgggtac atacctcgtt ttccacatcc gtttgtcagt tgatgacagc gatgatggtg
      181 atgacgatga cgatgacgac aactatgaca atgacttcat actcaggttg aactggttaa
      241 gatgatgcta gatttcatcc agtgtggaca atgaaacaca cagcagggac tgtcatctga
      301 agagagggaa caggcaatgg actggtgggg ataaccggac aaggaacact ggtacttgta
      361 aaggcaggct ctgaggattg gattcaggtc atgaggcttg cccgcaagtg gcatttgcca
      421 tctcaccagc cctccccaat caaagacaat gtccacacga aggatgtttt aaatgaagcg
      481 ccaagtcctc caagccaact gccccatgag cctctgttca atttattcga ctcccggatc
      541 actgtaagaa tgctgaggtt acagctgtgt accacctcat caagctttct cctgggtttc
      601 agggattgaa cttggttcat caagtttgtg tggaatgtat ctataaagac tggccttggc
      661 acctctggta agaatgagct agtgataaac ctcatgtgtg atgatggctt ctttcaaaga
      721 gaagcaccgg gatttgaaag ccattggtgg ggagcatcgt gaccctgtcc ttctggaaat
      781 cctcaccttg actgcagagg acctggctgt tgctgtctta ggaatcagtt gggcttgtgc
      841 tagttgacat atctaacatt tctttgtctt tctcttttct taaggataat ctttctacac
      901 ttcacaatgt tcagattctc cagagttcta gacttgaccc accgttcatc ctaatcctct
      961 ggacttctaa ccagatccct tctctccctg agccttcatt atcagccctc atagactccc
     1021 tagctcatgg tagagccatg tcagattccc actgaatggt tctagccaat ggacctcaga
     1081 cacttagatt cctcctcaca aagctaatct cttgtcactt ttcttttatg
//